Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Col5a1O88207 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col5a1O88207 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.32□□□□□ -0.44
Col5a1O88207 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col5a1O88207 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Col5a1O88207 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC12.32□□□□□ -0.44
Col5a1O88207 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col5a1O88207 Gm24255-201ENSMUST00000104481 128 ntBASIC12.32□□□□□ -0.44
Col5a1O88207 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col5a1O88207 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col5a1O88207 Gm5687-201ENSMUST00000118252 640 ntBASIC12.32□□□□□ -0.44
Col5a1O88207 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col5a1O88207 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col5a1O88207 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.32□□□□□ -0.44
Col5a1O88207 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.32□□□□□ -0.44
Col5a1O88207 Gm42550-201ENSMUST00000201553 960 ntBASIC12.32□□□□□ -0.44
Col5a1O88207 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col5a1O88207 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.32□□□□□ -0.44
Col5a1O88207 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Col5a1O88207 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col5a1O88207 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.31□□□□□ -0.44
Col5a1O88207 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col5a1O88207 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col5a1O88207 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col5a1O88207 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col5a1O88207 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col5a1O88207 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.31□□□□□ -0.44
Col5a1O88207 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.31□□□□□ -0.44
Col5a1O88207 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.31□□□□□ -0.44
Col5a1O88207 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Col5a1O88207 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col5a1O88207 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col5a1O88207 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col5a1O88207 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col5a1O88207 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Col5a1O88207 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col5a1O88207 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col5a1O88207 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col5a1O88207 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col5a1O88207 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col5a1O88207 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col5a1O88207 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
Col5a1O88207 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col5a1O88207 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col5a1O88207 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col5a1O88207 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col5a1O88207 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col5a1O88207 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col5a1O88207 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col5a1O88207 Gm13123-201ENSMUST00000122173 492 ntBASIC12.3□□□□□ -0.44
Col5a1O88207 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.3□□□□□ -0.44
Col5a1O88207 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.3□□□□□ -0.44
Col5a1O88207 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col5a1O88207 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col5a1O88207 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col5a1O88207 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col5a1O88207 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col5a1O88207 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col5a1O88207 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col5a1O88207 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Col5a1O88207 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col5a1O88207 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col5a1O88207 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col5a1O88207 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col5a1O88207 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Col5a1O88207 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col5a1O88207 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Col5a1O88207 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col5a1O88207 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.3□□□□□ -0.44
Col5a1O88207 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col5a1O88207 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Col5a1O88207 Gm14350-201ENSMUST00000116642 640 ntBASIC12.3□□□□□ -0.44
Col5a1O88207 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col5a1O88207 Gm20482-202ENSMUST00000174729 825 ntBASIC12.3□□□□□ -0.44
Col5a1O88207 Gm26927-201ENSMUST00000182385 965 ntBASIC12.3□□□□□ -0.44
Col5a1O88207 Gm37922-201ENSMUST00000195596 455 ntBASIC12.3□□□□□ -0.44
Col5a1O88207 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.3□□□□□ -0.44
Col5a1O88207 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.3□□□□□ -0.44
Col5a1O88207 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col5a1O88207 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col5a1O88207 Gm16372-201ENSMUST00000073088 450 ntBASIC12.3□□□□□ -0.44
Col5a1O88207 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col5a1O88207 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col5a1O88207 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col5a1O88207 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col5a1O88207 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col5a1O88207 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col5a1O88207 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col5a1O88207 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col5a1O88207 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col5a1O88207 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col5a1O88207 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col5a1O88207 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col5a1O88207 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Col5a1O88207 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col5a1O88207 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col5a1O88207 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col5a1O88207 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col5a1O88207 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col5a1O88207 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms