Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ubr1O70481 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ubr1O70481 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ubr1O70481 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ubr1O70481 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ubr1O70481 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ubr1O70481 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ubr1O70481 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ubr1O70481 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ubr1O70481 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ubr1O70481 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ubr1O70481 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ubr1O70481 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ubr1O70481 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ubr1O70481 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ubr1O70481 Gm15236-201ENSMUST00000117309 379 ntBASIC17.64■□□□□ 0.41
Ubr1O70481 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ubr1O70481 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ubr1O70481 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.64■□□□□ 0.41
Ubr1O70481 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ubr1O70481 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ubr1O70481 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ubr1O70481 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ubr1O70481 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ubr1O70481 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ubr1O70481 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ubr1O70481 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ubr1O70481 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC17.63■□□□□ 0.41
Ubr1O70481 Gm24548-201ENSMUST00000158650 108 ntBASIC17.63■□□□□ 0.41
Ubr1O70481 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Ubr1O70481 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC17.63■□□□□ 0.41
Ubr1O70481 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC17.63■□□□□ 0.41
Ubr1O70481 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC17.63■□□□□ 0.41
Ubr1O70481 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubr1O70481 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubr1O70481 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
Ubr1O70481 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubr1O70481 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubr1O70481 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubr1O70481 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubr1O70481 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC17.63■□□□□ 0.41
Ubr1O70481 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC17.63■□□□□ 0.41
Ubr1O70481 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC17.63■□□□□ 0.41
Ubr1O70481 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubr1O70481 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ubr1O70481 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
Ubr1O70481 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Ubr1O70481 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubr1O70481 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubr1O70481 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubr1O70481 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ubr1O70481 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ubr1O70481 AC101945.2-201ENSMUST00000227886 1377 ntBASIC17.62■□□□□ 0.41
Ubr1O70481 Mmp14-206ENSMUST00000225641 3238 ntBASIC17.62■□□□□ 0.41
Ubr1O70481 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubr1O70481 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubr1O70481 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubr1O70481 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubr1O70481 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC17.62■□□□□ 0.41
Ubr1O70481 Gm5637-201ENSMUST00000153890 1119 ntBASIC17.62■□□□□ 0.41
Ubr1O70481 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC17.62■□□□□ 0.41
Ubr1O70481 Gm22121-201ENSMUST00000175148 54 ntBASIC17.62■□□□□ 0.41
Ubr1O70481 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ubr1O70481 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ubr1O70481 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubr1O70481 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubr1O70481 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubr1O70481 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubr1O70481 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ubr1O70481 Gm43579-201ENSMUST00000202387 1307 ntBASIC17.62■□□□□ 0.41
Ubr1O70481 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubr1O70481 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubr1O70481 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ubr1O70481 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ubr1O70481 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ubr1O70481 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ubr1O70481 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ubr1O70481 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC17.61■□□□□ 0.41
Ubr1O70481 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ubr1O70481 Gm5781-201ENSMUST00000219792 443 ntBASIC17.61■□□□□ 0.41
Ubr1O70481 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ubr1O70481 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ubr1O70481 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ubr1O70481 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ubr1O70481 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ubr1O70481 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ubr1O70481 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ubr1O70481 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ubr1O70481 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ubr1O70481 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ubr1O70481 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ubr1O70481 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ubr1O70481 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
Ubr1O70481 Gm6161-201ENSMUST00000121942 1102 ntBASIC17.61■□□□□ 0.41
Ubr1O70481 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ubr1O70481 Gm6254-201ENSMUST00000168178 1072 ntBASIC17.61■□□□□ 0.41
Ubr1O70481 Gm6153-201ENSMUST00000172004 1058 ntBASIC17.61■□□□□ 0.41
Ubr1O70481 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ubr1O70481 Gm4857-201ENSMUST00000192718 785 ntBASIC17.61■□□□□ 0.41
Ubr1O70481 Gm5641-202ENSMUST00000198699 1080 ntBASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms