Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pde6dO55057 Gm44719-201ENSMUST00000206404 149 ntBASIC10.92□□□□□ -0.66
Pde6dO55057 AC159106.1-201ENSMUST00000224421 690 ntBASIC10.92□□□□□ -0.66
Pde6dO55057 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pde6dO55057 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pde6dO55057 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pde6dO55057 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC10.92□□□□□ -0.66
Pde6dO55057 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pde6dO55057 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pde6dO55057 Gm5939-201ENSMUST00000119613 2874 ntBASIC10.92□□□□□ -0.66
Pde6dO55057 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pde6dO55057 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pde6dO55057 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pde6dO55057 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pde6dO55057 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pde6dO55057 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pde6dO55057 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Pde6dO55057 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pde6dO55057 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Pde6dO55057 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pde6dO55057 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Pde6dO55057 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC10.92□□□□□ -0.66
Pde6dO55057 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pde6dO55057 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pde6dO55057 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Gm9347-201ENSMUST00000211473 1607 ntBASIC10.91□□□□□ -0.66
Pde6dO55057 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.91□□□□□ -0.66
Pde6dO55057 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Pde6dO55057 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC10.91□□□□□ -0.66
Pde6dO55057 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC10.91□□□□□ -0.66
Pde6dO55057 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC10.91□□□□□ -0.66
Pde6dO55057 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Pde6dO55057 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC10.91□□□□□ -0.66
Pde6dO55057 AC153881.2-201ENSMUST00000214877 204 ntBASIC10.91□□□□□ -0.66
Pde6dO55057 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC10.91□□□□□ -0.66
Pde6dO55057 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC10.91□□□□□ -0.66
Pde6dO55057 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Pde6dO55057 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Pde6dO55057 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Pde6dO55057 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.91□□□□□ -0.66
Pde6dO55057 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Pde6dO55057 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.91□□□□□ -0.66
Pde6dO55057 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pde6dO55057 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pde6dO55057 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pde6dO55057 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pde6dO55057 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pde6dO55057 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Pde6dO55057 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pde6dO55057 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pde6dO55057 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.9□□□□□ -0.66
Pde6dO55057 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pde6dO55057 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pde6dO55057 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pde6dO55057 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.9□□□□□ -0.66
Pde6dO55057 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pde6dO55057 Gm8775-201ENSMUST00000170943 1327 ntBASIC10.9□□□□□ -0.66
Pde6dO55057 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pde6dO55057 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pde6dO55057 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.9□□□□□ -0.66
Pde6dO55057 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pde6dO55057 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms