Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Gm15823-201ENSMUST00000064305 670 ntBASIC16.2■□□□□ 0.18
Tcof1O08784 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.2■□□□□ 0.18
Tcof1O08784 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tcof1O08784 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Tcof1O08784 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Tcof1O08784 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tcof1O08784 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tcof1O08784 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Tcof1O08784 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tcof1O08784 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.2■□□□□ 0.18
Tcof1O08784 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tcof1O08784 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tcof1O08784 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.2■□□□□ 0.18
Tcof1O08784 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tcof1O08784 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tcof1O08784 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tcof1O08784 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Tcof1O08784 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tcof1O08784 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tcof1O08784 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Tcof1O08784 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tcof1O08784 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Tcof1O08784 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tcof1O08784 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Tcof1O08784 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC16.19■□□□□ 0.18
Tcof1O08784 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tcof1O08784 Gm18018-201ENSMUST00000198273 408 ntBASIC16.19■□□□□ 0.18
Tcof1O08784 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Tcof1O08784 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Tcof1O08784 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tcof1O08784 Cdk7-205ENSMUST00000225990 1159 ntBASIC16.19■□□□□ 0.18
Tcof1O08784 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tcof1O08784 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tcof1O08784 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tcof1O08784 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tcof1O08784 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tcof1O08784 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tcof1O08784 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tcof1O08784 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.19■□□□□ 0.18
Tcof1O08784 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tcof1O08784 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tcof1O08784 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Tcof1O08784 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.19■□□□□ 0.18
Tcof1O08784 Gm42872-201ENSMUST00000200026 1967 ntBASIC16.19■□□□□ 0.18
Tcof1O08784 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tcof1O08784 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tcof1O08784 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tcof1O08784 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Tcof1O08784 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tcof1O08784 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tcof1O08784 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tcof1O08784 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
Tcof1O08784 Gm12341-201ENSMUST00000119724 503 ntBASIC16.19■□□□□ 0.18
Tcof1O08784 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.19■□□□□ 0.18
Tcof1O08784 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.19■□□□□ 0.18
Tcof1O08784 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tcof1O08784 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tcof1O08784 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tcof1O08784 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tcof1O08784 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Tcof1O08784 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.18■□□□□ 0.18
Tcof1O08784 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tcof1O08784 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.18■□□□□ 0.18
Tcof1O08784 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tcof1O08784 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tcof1O08784 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tcof1O08784 Gm15222-202ENSMUST00000228667 1726 ntBASIC16.18■□□□□ 0.18
Tcof1O08784 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tcof1O08784 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.18■□□□□ 0.18
Tcof1O08784 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Tcof1O08784 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tcof1O08784 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tcof1O08784 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tcof1O08784 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tcof1O08784 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Tcof1O08784 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tcof1O08784 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tcof1O08784 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tcof1O08784 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tcof1O08784 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tcof1O08784 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Tcof1O08784 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tcof1O08784 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tcof1O08784 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tcof1O08784 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16.18■□□□□ 0.18
Tcof1O08784 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tcof1O08784 Gm15678-201ENSMUST00000117573 960 ntBASIC16.18■□□□□ 0.18
Tcof1O08784 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Tcof1O08784 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.18■□□□□ 0.18
Tcof1O08784 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Tcof1O08784 Gm24420-201ENSMUST00000176676 59 ntBASIC16.18■□□□□ 0.18
Tcof1O08784 Gm2445-201ENSMUST00000182798 989 ntBASIC16.18■□□□□ 0.18
Tcof1O08784 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
Tcof1O08784 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tcof1O08784 Gm45384-201ENSMUST00000210451 277 ntBASIC16.18■□□□□ 0.18
Tcof1O08784 Gm19220-201ENSMUST00000222682 803 ntBASIC16.18■□□□□ 0.18
Tcof1O08784 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Tcof1O08784 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Tcof1O08784 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Tcof1O08784 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms