Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Gm27663-201ENSMUST00000184839 110 ntBASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Syt7-204ENSMUST00000223586 1344 ntBASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cpsf4lE9Q2N0 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cpsf4lE9Q2N0 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Gm24420-201ENSMUST00000176676 59 ntBASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cpsf4lE9Q2N0 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms