Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Gm5279-201ENSMUST00000199575 745 ntBASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdh17E9PXF0 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 Gm12341-201ENSMUST00000119724 503 ntBASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 Gm17795-201ENSMUST00000214505 757 ntBASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdh17E9PXF0 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 Gm37714-201ENSMUST00000194742 342 ntBASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdh17E9PXF0 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms