Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Chd6A3KFM7 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Chd6A3KFM7 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Carlr-201ENSMUST00000181515 2574 ntBASIC11.09□□□□□ -0.63
Chd6A3KFM7 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Gm42918-201ENSMUST00000199249 1580 ntBASIC11.09□□□□□ -0.63
Chd6A3KFM7 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd6A3KFM7 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.09□□□□□ -0.63
Chd6A3KFM7 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC11.09□□□□□ -0.63
Chd6A3KFM7 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd6A3KFM7 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Gm11618-201ENSMUST00000117946 267 ntBASIC11.09□□□□□ -0.63
Chd6A3KFM7 Mir1901-201ENSMUST00000122616 78 ntBASIC11.09□□□□□ -0.63
Chd6A3KFM7 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC11.09□□□□□ -0.63
Chd6A3KFM7 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chd6A3KFM7 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chd6A3KFM7 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Gm12036-201ENSMUST00000120008 530 ntBASIC11.08□□□□□ -0.64
Chd6A3KFM7 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Gm3096-201ENSMUST00000185770 364 ntBASIC11.08□□□□□ -0.64
Chd6A3KFM7 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Gm5434-202ENSMUST00000222384 1451 ntBASIC11.08□□□□□ -0.64
Chd6A3KFM7 Gm5434-201ENSMUST00000071825 1451 ntBASIC11.08□□□□□ -0.64
Chd6A3KFM7 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd6A3KFM7 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.08□□□□□ -0.64
Chd6A3KFM7 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Gm12165-201ENSMUST00000117047 342 ntBASIC11.08□□□□□ -0.64
Chd6A3KFM7 Gm13045-201ENSMUST00000119019 712 ntBASIC11.08□□□□□ -0.64
Chd6A3KFM7 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Chd6A3KFM7 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms