Protein–RNA interactions for Protein: A0A0U1RNF2

Lcmt1, Leucine carboxyl methyltransferase 1, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcmt1A0A0U1RNF2 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lcmt1A0A0U1RNF2 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lcmt1A0A0U1RNF2 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.46■□□□□ 0.07
Lcmt1A0A0U1RNF2 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Lcmt1A0A0U1RNF2 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.46■□□□□ 0.07
Lcmt1A0A0U1RNF2 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lcmt1A0A0U1RNF2 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lcmt1A0A0U1RNF2 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lcmt1A0A0U1RNF2 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lcmt1A0A0U1RNF2 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lcmt1A0A0U1RNF2 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Lcmt1A0A0U1RNF2 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Lcmt1A0A0U1RNF2 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Lcmt1A0A0U1RNF2 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Lcmt1A0A0U1RNF2 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Lcmt1A0A0U1RNF2 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Lcmt1A0A0U1RNF2 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 Gm27622-201ENSMUST00000183779 60 ntBASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Lcmt1A0A0U1RNF2 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Lcmt1A0A0U1RNF2 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Lcmt1A0A0U1RNF2 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Lcmt1A0A0U1RNF2 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Lcmt1A0A0U1RNF2 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Lcmt1A0A0U1RNF2 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lcmt1A0A0U1RNF2 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lcmt1A0A0U1RNF2 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Lcmt1A0A0U1RNF2 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Lcmt1A0A0U1RNF2 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lcmt1A0A0U1RNF2 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lcmt1A0A0U1RNF2 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lcmt1A0A0U1RNF2 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lcmt1A0A0U1RNF2 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lcmt1A0A0U1RNF2 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.44■□□□□ 0.06
Lcmt1A0A0U1RNF2 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lcmt1A0A0U1RNF2 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lcmt1A0A0U1RNF2 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Lcmt1A0A0U1RNF2 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.44■□□□□ 0.06
Lcmt1A0A0U1RNF2 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.44■□□□□ 0.06
Lcmt1A0A0U1RNF2 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.44■□□□□ 0.06
Lcmt1A0A0U1RNF2 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lcmt1A0A0U1RNF2 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lcmt1A0A0U1RNF2 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lcmt1A0A0U1RNF2 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lcmt1A0A0U1RNF2 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lcmt1A0A0U1RNF2 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lcmt1A0A0U1RNF2 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lcmt1A0A0U1RNF2 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lcmt1A0A0U1RNF2 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lcmt1A0A0U1RNF2 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Lcmt1A0A0U1RNF2 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lcmt1A0A0U1RNF2 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lcmt1A0A0U1RNF2 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lcmt1A0A0U1RNF2 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lcmt1A0A0U1RNF2 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lcmt1A0A0U1RNF2 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lcmt1A0A0U1RNF2 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lcmt1A0A0U1RNF2 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lcmt1A0A0U1RNF2 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.43■□□□□ 0.06
Lcmt1A0A0U1RNF2 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lcmt1A0A0U1RNF2 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Lcmt1A0A0U1RNF2 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lcmt1A0A0U1RNF2 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.43■□□□□ 0.06
Lcmt1A0A0U1RNF2 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.43■□□□□ 0.06
Lcmt1A0A0U1RNF2 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.43■□□□□ 0.06
Lcmt1A0A0U1RNF2 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms