Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm6944-201ENSMUST00000182449 1006 ntBASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm43347-201ENSMUST00000200226 580 ntBASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Birc2-201ENSMUST00000054878 378 ntBASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Spr-ps1-201ENSMUST00000089584 605 ntBASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Best4-ps-201ENSMUST00000129783 1380 ntBASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm8096-201ENSMUST00000209921 1591 ntBASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm5682-201ENSMUST00000173402 505 ntBASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm9726-201ENSMUST00000180321 678 ntBASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 AC158538.1-201ENSMUST00000225870 294 ntBASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm14042-201ENSMUST00000120139 833 ntBASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm44357-201ENSMUST00000195897 142 ntBASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm19658-201ENSMUST00000196231 138 ntBASIC10.48□□□□□ -0.73
Trav3n-3A0A0G2JEM0 Gm44367-201ENSMUST00000196836 138 ntBASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms