Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 AC124549.3-201ENSMUST00000225541 367 ntBASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.63□□□□□ -0.55
Trav5-4A0A075B652 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Gm4995-201ENSMUST00000117247 432 ntBASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Gm13365-201ENSMUST00000121188 973 ntBASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Gm29310-201ENSMUST00000185468 696 ntBASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Gm21825-201ENSMUST00000185728 696 ntBASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Gm29109-201ENSMUST00000185895 696 ntBASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Gm21896-201ENSMUST00000186520 696 ntBASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Gm21873-201ENSMUST00000186728 696 ntBASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Gm21794-201ENSMUST00000187056 696 ntBASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Gm21880-201ENSMUST00000187275 696 ntBASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Gm21826-201ENSMUST00000187451 696 ntBASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Gm21198-201ENSMUST00000188393 696 ntBASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Gm21749-201ENSMUST00000189343 696 ntBASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Gm21901-201ENSMUST00000189568 696 ntBASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Gm29424-201ENSMUST00000189716 696 ntBASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Gm28599-201ENSMUST00000189838 694 ntBASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Gm21867-201ENSMUST00000189917 696 ntBASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Gm29269-201ENSMUST00000190087 696 ntBASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Gm21722-201ENSMUST00000190153 696 ntBASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Gm28423-201ENSMUST00000190701 696 ntBASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Gm21899-201ENSMUST00000190745 696 ntBASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Gm21910-201ENSMUST00000191163 696 ntBASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Gm21849-201ENSMUST00000191571 696 ntBASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Gm28678-201ENSMUST00000191593 696 ntBASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Gm20910-201ENSMUST00000193268 696 ntBASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Gm21871-201ENSMUST00000194621 696 ntBASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav5-4A0A075B652 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Gm11594-201ENSMUST00000122313 162 ntBASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC11.61□□□□□ -0.55
Trav5-4A0A075B652 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms