Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb2S4R1M3 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb2S4R1M3 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
H2afb2S4R1M3 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb2S4R1M3 Gm13616-201ENSMUST00000120600 222 ntBASIC13.9□□□□□ -0.18
H2afb2S4R1M3 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb2S4R1M3 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
H2afb2S4R1M3 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb2S4R1M3 Gm21470-201ENSMUST00000187680 696 ntBASIC13.9□□□□□ -0.18
H2afb2S4R1M3 Gm6888-201ENSMUST00000221983 706 ntBASIC13.9□□□□□ -0.18
H2afb2S4R1M3 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb2S4R1M3 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb2S4R1M3 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb2S4R1M3 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb2S4R1M3 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
H2afb2S4R1M3 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
H2afb2S4R1M3 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb2S4R1M3 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb2S4R1M3 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb2S4R1M3 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
H2afb2S4R1M3 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb2S4R1M3 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.9□□□□□ -0.18
H2afb2S4R1M3 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb2S4R1M3 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
H2afb2S4R1M3 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
H2afb2S4R1M3 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
H2afb2S4R1M3 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
H2afb2S4R1M3 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.9□□□□□ -0.19
H2afb2S4R1M3 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb2S4R1M3 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
H2afb2S4R1M3 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
H2afb2S4R1M3 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb2S4R1M3 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb2S4R1M3 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb2S4R1M3 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb2S4R1M3 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb2S4R1M3 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb2S4R1M3 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
H2afb2S4R1M3 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb2S4R1M3 Gm38294-201ENSMUST00000192831 381 ntBASIC13.89□□□□□ -0.19
H2afb2S4R1M3 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.89□□□□□ -0.19
H2afb2S4R1M3 Gm44344-201ENSMUST00000200287 129 ntBASIC13.89□□□□□ -0.19
H2afb2S4R1M3 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb2S4R1M3 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb2S4R1M3 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb2S4R1M3 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb2S4R1M3 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb2S4R1M3 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb2S4R1M3 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb2S4R1M3 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb2S4R1M3 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.89□□□□□ -0.19
H2afb2S4R1M3 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb2S4R1M3 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb2S4R1M3 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb2S4R1M3 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC13.89□□□□□ -0.19
H2afb2S4R1M3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb2S4R1M3 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
H2afb2S4R1M3 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
H2afb2S4R1M3 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
H2afb2S4R1M3 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Gm15393-201ENSMUST00000120499 219 ntBASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Gm14767-201ENSMUST00000121559 586 ntBASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Gm17837-201ENSMUST00000186435 985 ntBASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
H2afb2S4R1M3 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms