Protein–RNA interactions for Protein: Q9Z2E2

Mbd1, Methyl-CpG-binding domain protein 1, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd1Q9Z2E2 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd1Q9Z2E2 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd1Q9Z2E2 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd1Q9Z2E2 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd1Q9Z2E2 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd1Q9Z2E2 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd1Q9Z2E2 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd1Q9Z2E2 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.17□□□□□ -0.14
Mbd1Q9Z2E2 Gm10253-201ENSMUST00000194270 940 ntBASIC14.17□□□□□ -0.14
Mbd1Q9Z2E2 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.17□□□□□ -0.14
Mbd1Q9Z2E2 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd1Q9Z2E2 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd1Q9Z2E2 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Mbd1Q9Z2E2 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd1Q9Z2E2 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.17□□□□□ -0.14
Mbd1Q9Z2E2 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd1Q9Z2E2 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd1Q9Z2E2 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd1Q9Z2E2 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd1Q9Z2E2 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd1Q9Z2E2 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd1Q9Z2E2 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd1Q9Z2E2 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd1Q9Z2E2 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Mbd1Q9Z2E2 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd1Q9Z2E2 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.17□□□□□ -0.14
Mbd1Q9Z2E2 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mbd1Q9Z2E2 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Mbd1Q9Z2E2 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.17□□□□□ -0.14
Mbd1Q9Z2E2 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Mbd1Q9Z2E2 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mbd1Q9Z2E2 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Mbd1Q9Z2E2 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mbd1Q9Z2E2 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Mbd1Q9Z2E2 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.16□□□□□ -0.14
Mbd1Q9Z2E2 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Mbd1Q9Z2E2 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Mbd1Q9Z2E2 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Mbd1Q9Z2E2 Gm24543-201ENSMUST00000103867 82 ntBASIC14.16□□□□□ -0.14
Mbd1Q9Z2E2 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mbd1Q9Z2E2 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Mbd1Q9Z2E2 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.16□□□□□ -0.14
Mbd1Q9Z2E2 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mbd1Q9Z2E2 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.16□□□□□ -0.14
Mbd1Q9Z2E2 Gm28630-201ENSMUST00000187806 498 ntBASIC14.16□□□□□ -0.14
Mbd1Q9Z2E2 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.16□□□□□ -0.14
Mbd1Q9Z2E2 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mbd1Q9Z2E2 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.16□□□□□ -0.14
Mbd1Q9Z2E2 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.16□□□□□ -0.14
Mbd1Q9Z2E2 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.16□□□□□ -0.14
Mbd1Q9Z2E2 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mbd1Q9Z2E2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mbd1Q9Z2E2 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mbd1Q9Z2E2 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Mbd1Q9Z2E2 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mbd1Q9Z2E2 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mbd1Q9Z2E2 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Mbd1Q9Z2E2 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Mbd1Q9Z2E2 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.16□□□□□ -0.14
Mbd1Q9Z2E2 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mbd1Q9Z2E2 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Gm27321-201ENSMUST00000185021 205 ntBASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Mbd1Q9Z2E2 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Mbd1Q9Z2E2 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms