Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Gm27920-201ENSMUST00000183953 96 ntBASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Gm27628-201ENSMUST00000184911 107 ntBASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cx3cr1Q9Z0D9 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Gm15957-201ENSMUST00000118893 974 ntBASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 CT025626.1-201ENSMUST00000223735 1455 ntBASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cx3cr1Q9Z0D9 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cx3cr1Q9Z0D9 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cx3cr1Q9Z0D9 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.73□□□□□ -0.53
Cx3cr1Q9Z0D9 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cx3cr1Q9Z0D9 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cx3cr1Q9Z0D9 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cx3cr1Q9Z0D9 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cx3cr1Q9Z0D9 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cx3cr1Q9Z0D9 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cx3cr1Q9Z0D9 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC11.73□□□□□ -0.53
Cx3cr1Q9Z0D9 Gm11452-201ENSMUST00000122376 690 ntBASIC11.73□□□□□ -0.53
Cx3cr1Q9Z0D9 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Cx3cr1Q9Z0D9 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cx3cr1Q9Z0D9 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cx3cr1Q9Z0D9 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.73□□□□□ -0.53
Cx3cr1Q9Z0D9 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cx3cr1Q9Z0D9 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cx3cr1Q9Z0D9 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cx3cr1Q9Z0D9 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cx3cr1Q9Z0D9 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cx3cr1Q9Z0D9 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cx3cr1Q9Z0D9 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cx3cr1Q9Z0D9 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms