Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Gm2445-201ENSMUST00000182798 989 ntBASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Gm5425-201ENSMUST00000214125 459 ntBASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lhx9Q9WUH2 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 Gm29741-201ENSMUST00000192667 421 ntBASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx9Q9WUH2 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Lhx9Q9WUH2 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx9Q9WUH2 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx9Q9WUH2 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx9Q9WUH2 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx9Q9WUH2 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.16□□□□□ -0.3
Lhx9Q9WUH2 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx9Q9WUH2 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx9Q9WUH2 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx9Q9WUH2 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx9Q9WUH2 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
Lhx9Q9WUH2 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx9Q9WUH2 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Lhx9Q9WUH2 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Lhx9Q9WUH2 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx9Q9WUH2 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx9Q9WUH2 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx9Q9WUH2 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Lhx9Q9WUH2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx9Q9WUH2 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Lhx9Q9WUH2 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx9Q9WUH2 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx9Q9WUH2 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx9Q9WUH2 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.16□□□□□ -0.3
Lhx9Q9WUH2 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms