Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six6Q9QZ28 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six6Q9QZ28 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six6Q9QZ28 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Six6Q9QZ28 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Six6Q9QZ28 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Six6Q9QZ28 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.74□□□□□ -0.53
Six6Q9QZ28 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Six6Q9QZ28 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six6Q9QZ28 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Six6Q9QZ28 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.74□□□□□ -0.53
Six6Q9QZ28 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Six6Q9QZ28 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six6Q9QZ28 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Six6Q9QZ28 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Six6Q9QZ28 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Six6Q9QZ28 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Six6Q9QZ28 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Six6Q9QZ28 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Six6Q9QZ28 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Six6Q9QZ28 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Six6Q9QZ28 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Six6Q9QZ28 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Six6Q9QZ28 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Six6Q9QZ28 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Six6Q9QZ28 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Six6Q9QZ28 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.73□□□□□ -0.53
Six6Q9QZ28 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Six6Q9QZ28 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC11.73□□□□□ -0.53
Six6Q9QZ28 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.73□□□□□ -0.53
Six6Q9QZ28 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Six6Q9QZ28 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Six6Q9QZ28 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Six6Q9QZ28 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Six6Q9QZ28 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC11.73□□□□□ -0.53
Six6Q9QZ28 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC11.73□□□□□ -0.53
Six6Q9QZ28 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC11.73□□□□□ -0.53
Six6Q9QZ28 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Six6Q9QZ28 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Six6Q9QZ28 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Six6Q9QZ28 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Six6Q9QZ28 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Six6Q9QZ28 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Six6Q9QZ28 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Six6Q9QZ28 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Six6Q9QZ28 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Six6Q9QZ28 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Six6Q9QZ28 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Six6Q9QZ28 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC11.72□□□□□ -0.53
Six6Q9QZ28 AC108846.1-201ENSMUST00000214531 513 ntBASIC11.72□□□□□ -0.53
Six6Q9QZ28 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.72□□□□□ -0.53
Six6Q9QZ28 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 AC025913.2-201ENSMUST00000220136 1766 ntBASIC11.72□□□□□ -0.53
Six6Q9QZ28 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Six6Q9QZ28 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Six6Q9QZ28 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms