Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lime1Q9EQR5 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Lime1Q9EQR5 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lime1Q9EQR5 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Lime1Q9EQR5 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.07□□□□□ -0.48
Lime1Q9EQR5 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lime1Q9EQR5 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Lime1Q9EQR5 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lime1Q9EQR5 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Gm25287-201ENSMUST00000103846 110 ntBASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Gm22918-201ENSMUST00000103855 110 ntBASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Gm14494-201ENSMUST00000118786 435 ntBASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Gm9719-201ENSMUST00000162765 543 ntBASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Gm18766-201ENSMUST00000189811 808 ntBASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.06□□□□□ -0.48
Lime1Q9EQR5 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lime1Q9EQR5 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Gm11779-201ENSMUST00000118541 368 ntBASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Gm18889-201ENSMUST00000174284 929 ntBASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lime1Q9EQR5 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms