Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Hmg20aQ9DC33 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Hmg20aQ9DC33 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Gm6296-201ENSMUST00000222599 943 ntBASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Hmg20aQ9DC33 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmg20aQ9DC33 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.65□□□□□ -0.38
Hmg20aQ9DC33 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmg20aQ9DC33 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmg20aQ9DC33 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmg20aQ9DC33 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmg20aQ9DC33 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmg20aQ9DC33 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.65□□□□□ -0.38
Hmg20aQ9DC33 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmg20aQ9DC33 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Hmg20aQ9DC33 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmg20aQ9DC33 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmg20aQ9DC33 Gm8749-201ENSMUST00000117737 331 ntBASIC12.65□□□□□ -0.38
Hmg20aQ9DC33 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Hmg20aQ9DC33 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmg20aQ9DC33 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms