Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.62■□□□□ 0.25
Chmp4cQ9D7F7 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp4cQ9D7F7 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp4cQ9D7F7 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Chmp4cQ9D7F7 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp4cQ9D7F7 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
Chmp4cQ9D7F7 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Chmp4cQ9D7F7 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp4cQ9D7F7 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp4cQ9D7F7 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp4cQ9D7F7 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp4cQ9D7F7 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp4cQ9D7F7 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp4cQ9D7F7 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
Chmp4cQ9D7F7 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.62■□□□□ 0.25
Chmp4cQ9D7F7 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp4cQ9D7F7 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp4cQ9D7F7 Gm37844-201ENSMUST00000192473 4097 ntBASIC16.61■□□□□ 0.25
Chmp4cQ9D7F7 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
Chmp4cQ9D7F7 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp4cQ9D7F7 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp4cQ9D7F7 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp4cQ9D7F7 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp4cQ9D7F7 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Chmp4cQ9D7F7 Gm13823-201ENSMUST00000119930 345 ntBASIC16.61■□□□□ 0.25
Chmp4cQ9D7F7 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.61■□□□□ 0.25
Chmp4cQ9D7F7 Mir6990-201ENSMUST00000183724 91 ntBASIC16.61■□□□□ 0.25
Chmp4cQ9D7F7 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.61■□□□□ 0.25
Chmp4cQ9D7F7 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp4cQ9D7F7 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp4cQ9D7F7 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.61■□□□□ 0.25
Chmp4cQ9D7F7 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC16.61■□□□□ 0.25
Chmp4cQ9D7F7 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp4cQ9D7F7 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Chmp4cQ9D7F7 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp4cQ9D7F7 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Chmp4cQ9D7F7 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp4cQ9D7F7 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp4cQ9D7F7 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp4cQ9D7F7 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp4cQ9D7F7 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp4cQ9D7F7 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp4cQ9D7F7 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp4cQ9D7F7 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
Chmp4cQ9D7F7 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.6■□□□□ 0.25
Chmp4cQ9D7F7 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp4cQ9D7F7 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.6■□□□□ 0.25
Chmp4cQ9D7F7 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.6■□□□□ 0.25
Chmp4cQ9D7F7 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp4cQ9D7F7 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp4cQ9D7F7 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp4cQ9D7F7 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp4cQ9D7F7 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp4cQ9D7F7 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp4cQ9D7F7 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Chmp4cQ9D7F7 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Chmp4cQ9D7F7 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC16.6■□□□□ 0.25
Chmp4cQ9D7F7 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp4cQ9D7F7 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp4cQ9D7F7 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.6■□□□□ 0.25
Chmp4cQ9D7F7 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp4cQ9D7F7 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp4cQ9D7F7 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC16.6■□□□□ 0.25
Chmp4cQ9D7F7 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp4cQ9D7F7 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp4cQ9D7F7 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp4cQ9D7F7 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Gm12882-201ENSMUST00000121696 517 ntBASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Mir1895-201ENSMUST00000122615 79 ntBASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Gm43474-201ENSMUST00000196415 774 ntBASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp4cQ9D7F7 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms