Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rita1Q9D1H0 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rita1Q9D1H0 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Rita1Q9D1H0 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rita1Q9D1H0 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rita1Q9D1H0 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.75□□□□□ -0.37
Rita1Q9D1H0 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.75□□□□□ -0.37
Rita1Q9D1H0 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rita1Q9D1H0 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rita1Q9D1H0 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rita1Q9D1H0 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rita1Q9D1H0 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.75□□□□□ -0.37
Rita1Q9D1H0 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rita1Q9D1H0 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rita1Q9D1H0 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.75□□□□□ -0.37
Rita1Q9D1H0 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.75□□□□□ -0.37
Rita1Q9D1H0 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rita1Q9D1H0 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.75□□□□□ -0.37
Rita1Q9D1H0 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.75□□□□□ -0.37
Rita1Q9D1H0 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.75□□□□□ -0.37
Rita1Q9D1H0 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.75□□□□□ -0.37
Rita1Q9D1H0 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.75□□□□□ -0.37
Rita1Q9D1H0 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rita1Q9D1H0 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rita1Q9D1H0 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rita1Q9D1H0 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rita1Q9D1H0 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rita1Q9D1H0 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Rita1Q9D1H0 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Rita1Q9D1H0 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rita1Q9D1H0 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rita1Q9D1H0 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rita1Q9D1H0 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rita1Q9D1H0 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rita1Q9D1H0 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rita1Q9D1H0 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.75□□□□□ -0.37
Rita1Q9D1H0 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.74□□□□□ -0.37
Rita1Q9D1H0 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Gm5745-201ENSMUST00000183748 313 ntBASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Gm8515-201ENSMUST00000194852 576 ntBASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Gm19078-201ENSMUST00000206311 727 ntBASIC12.74□□□□□ -0.37
Rita1Q9D1H0 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rita1Q9D1H0 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rita1Q9D1H0 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rita1Q9D1H0 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Rita1Q9D1H0 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Rita1Q9D1H0 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rita1Q9D1H0 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rita1Q9D1H0 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rita1Q9D1H0 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rita1Q9D1H0 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rita1Q9D1H0 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rita1Q9D1H0 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rita1Q9D1H0 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rita1Q9D1H0 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rita1Q9D1H0 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rita1Q9D1H0 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rita1Q9D1H0 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Rita1Q9D1H0 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rita1Q9D1H0 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Rita1Q9D1H0 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rita1Q9D1H0 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rita1Q9D1H0 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Rita1Q9D1H0 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms