Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Chaf1bQ9D0N7 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Chaf1bQ9D0N7 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chaf1bQ9D0N7 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chaf1bQ9D0N7 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chaf1bQ9D0N7 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chaf1bQ9D0N7 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chaf1bQ9D0N7 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.05□□□□□ -0.32
Chaf1bQ9D0N7 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chaf1bQ9D0N7 Mir5131-201ENSMUST00000175426 93 ntBASIC13.05□□□□□ -0.32
Chaf1bQ9D0N7 Gm5177-201ENSMUST00000183092 997 ntBASIC13.05□□□□□ -0.32
Chaf1bQ9D0N7 Mir8098-201ENSMUST00000184011 137 ntBASIC13.05□□□□□ -0.32
Chaf1bQ9D0N7 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chaf1bQ9D0N7 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Chaf1bQ9D0N7 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chaf1bQ9D0N7 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chaf1bQ9D0N7 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Chaf1bQ9D0N7 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chaf1bQ9D0N7 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chaf1bQ9D0N7 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chaf1bQ9D0N7 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chaf1bQ9D0N7 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Chaf1bQ9D0N7 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.05□□□□□ -0.32
Chaf1bQ9D0N7 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.05□□□□□ -0.32
Chaf1bQ9D0N7 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Chaf1bQ9D0N7 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Chaf1bQ9D0N7 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1bQ9D0N7 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1bQ9D0N7 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1bQ9D0N7 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1bQ9D0N7 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Chaf1bQ9D0N7 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Chaf1bQ9D0N7 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1bQ9D0N7 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Chaf1bQ9D0N7 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.03□□□□□ -0.32
Chaf1bQ9D0N7 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1bQ9D0N7 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1bQ9D0N7 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1bQ9D0N7 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1bQ9D0N7 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1bQ9D0N7 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.03□□□□□ -0.32
Chaf1bQ9D0N7 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.03□□□□□ -0.32
Chaf1bQ9D0N7 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1bQ9D0N7 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1bQ9D0N7 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1bQ9D0N7 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1bQ9D0N7 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1bQ9D0N7 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Chaf1bQ9D0N7 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1bQ9D0N7 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1bQ9D0N7 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Chaf1bQ9D0N7 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Chaf1bQ9D0N7 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.03□□□□□ -0.32
Chaf1bQ9D0N7 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Chaf1bQ9D0N7 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Chaf1bQ9D0N7 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chaf1bQ9D0N7 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chaf1bQ9D0N7 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chaf1bQ9D0N7 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Chaf1bQ9D0N7 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chaf1bQ9D0N7 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chaf1bQ9D0N7 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Chaf1bQ9D0N7 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms