Protein–RNA interactions for Protein: Q9CWX4

Rpusd4, Mitochondrial RNA pseudouridine synthase Rpusd4, mousemouse

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd4Q9CWX4 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 CT025626.1-201ENSMUST00000223735 1455 ntBASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Gm6018-201ENSMUST00000216090 1306 ntBASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Rpusd4Q9CWX4 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Gm5479-201ENSMUST00000160578 435 ntBASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rpusd4Q9CWX4 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpusd4Q9CWX4 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rpusd4Q9CWX4 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpusd4Q9CWX4 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpusd4Q9CWX4 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.79□□□□□ -0.52
Rpusd4Q9CWX4 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpusd4Q9CWX4 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpusd4Q9CWX4 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rpusd4Q9CWX4 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Rpusd4Q9CWX4 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpusd4Q9CWX4 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpusd4Q9CWX4 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpusd4Q9CWX4 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Rpusd4Q9CWX4 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rpusd4Q9CWX4 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Rpusd4Q9CWX4 Gm14701-201ENSMUST00000117156 348 ntBASIC11.79□□□□□ -0.52
Rpusd4Q9CWX4 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rpusd4Q9CWX4 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms