Protein–RNA interactions for Protein: Q9CVD2

Atxn3, Ataxin-3, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn3Q9CVD2 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atxn3Q9CVD2 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC17.84■□□□□ 0.45
Atxn3Q9CVD2 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
Atxn3Q9CVD2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atxn3Q9CVD2 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Atxn3Q9CVD2 Gm18905-201ENSMUST00000205454 928 ntBASIC17.84■□□□□ 0.45
Atxn3Q9CVD2 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC17.84■□□□□ 0.45
Atxn3Q9CVD2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Atxn3Q9CVD2 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Atxn3Q9CVD2 Gm12626-201ENSMUST00000117339 1983 ntBASIC17.84■□□□□ 0.45
Atxn3Q9CVD2 Gm12623-201ENSMUST00000119849 1983 ntBASIC17.84■□□□□ 0.45
Atxn3Q9CVD2 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Atxn3Q9CVD2 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atxn3Q9CVD2 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atxn3Q9CVD2 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Atxn3Q9CVD2 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Atxn3Q9CVD2 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Atxn3Q9CVD2 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Atxn3Q9CVD2 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Atxn3Q9CVD2 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Atxn3Q9CVD2 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Atxn3Q9CVD2 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Atxn3Q9CVD2 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Atxn3Q9CVD2 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Atxn3Q9CVD2 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Atxn3Q9CVD2 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC17.83■□□□□ 0.45
Atxn3Q9CVD2 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Atxn3Q9CVD2 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Atxn3Q9CVD2 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Atxn3Q9CVD2 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Atxn3Q9CVD2 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Atxn3Q9CVD2 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC17.83■□□□□ 0.44
Atxn3Q9CVD2 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Atxn3Q9CVD2 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Atxn3Q9CVD2 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Atxn3Q9CVD2 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Atxn3Q9CVD2 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Atxn3Q9CVD2 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC17.83■□□□□ 0.44
Atxn3Q9CVD2 Gm5279-201ENSMUST00000199575 745 ntBASIC17.83■□□□□ 0.44
Atxn3Q9CVD2 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Atxn3Q9CVD2 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.83■□□□□ 0.44
Atxn3Q9CVD2 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Atxn3Q9CVD2 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Atxn3Q9CVD2 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Atxn3Q9CVD2 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Atxn3Q9CVD2 AC161252.3-201ENSMUST00000225465 1549 ntBASIC17.82■□□□□ 0.44
Atxn3Q9CVD2 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Atxn3Q9CVD2 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Atxn3Q9CVD2 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atxn3Q9CVD2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atxn3Q9CVD2 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atxn3Q9CVD2 Acot6-202ENSMUST00000222921 3622 ntBASIC17.82■□□□□ 0.44
Atxn3Q9CVD2 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atxn3Q9CVD2 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atxn3Q9CVD2 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atxn3Q9CVD2 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC17.82■□□□□ 0.44
Atxn3Q9CVD2 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Atxn3Q9CVD2 Gm15376-201ENSMUST00000122258 783 ntBASIC17.82■□□□□ 0.44
Atxn3Q9CVD2 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atxn3Q9CVD2 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Atxn3Q9CVD2 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC17.82■□□□□ 0.44
Atxn3Q9CVD2 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC17.82■□□□□ 0.44
Atxn3Q9CVD2 AC166997.1-201ENSMUST00000225122 572 ntBASIC17.82■□□□□ 0.44
Atxn3Q9CVD2 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atxn3Q9CVD2 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atxn3Q9CVD2 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atxn3Q9CVD2 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Atxn3Q9CVD2 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atxn3Q9CVD2 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atxn3Q9CVD2 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Atxn3Q9CVD2 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Atxn3Q9CVD2 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atxn3Q9CVD2 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Atxn3Q9CVD2 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Atxn3Q9CVD2 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Atxn3Q9CVD2 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atxn3Q9CVD2 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atxn3Q9CVD2 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Atxn3Q9CVD2 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atxn3Q9CVD2 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atxn3Q9CVD2 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atxn3Q9CVD2 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atxn3Q9CVD2 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atxn3Q9CVD2 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atxn3Q9CVD2 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Atxn3Q9CVD2 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC17.81■□□□□ 0.44
Atxn3Q9CVD2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atxn3Q9CVD2 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Atxn3Q9CVD2 Gm24420-201ENSMUST00000176676 59 ntBASIC17.81■□□□□ 0.44
Atxn3Q9CVD2 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC17.81■□□□□ 0.44
Atxn3Q9CVD2 AC135669.1-201ENSMUST00000213585 412 ntBASIC17.81■□□□□ 0.44
Atxn3Q9CVD2 Gm5425-201ENSMUST00000214125 459 ntBASIC17.81■□□□□ 0.44
Atxn3Q9CVD2 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atxn3Q9CVD2 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC17.81■□□□□ 0.44
Atxn3Q9CVD2 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atxn3Q9CVD2 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Atxn3Q9CVD2 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Atxn3Q9CVD2 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atxn3Q9CVD2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Atxn3Q9CVD2 Gm13859-201ENSMUST00000119936 1423 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms