Protein–RNA interactions for Protein: Q9CUN6

Smurf1, E3 ubiquitin-protein ligase SMURF1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1Q9CUN6 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Smurf1Q9CUN6 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.63□□□□□ -0.39
Smurf1Q9CUN6 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smurf1Q9CUN6 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smurf1Q9CUN6 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smurf1Q9CUN6 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smurf1Q9CUN6 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smurf1Q9CUN6 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smurf1Q9CUN6 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.63□□□□□ -0.39
Smurf1Q9CUN6 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smurf1Q9CUN6 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.63□□□□□ -0.39
Smurf1Q9CUN6 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smurf1Q9CUN6 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smurf1Q9CUN6 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smurf1Q9CUN6 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smurf1Q9CUN6 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.63□□□□□ -0.39
Smurf1Q9CUN6 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smurf1Q9CUN6 Gm9182-201ENSMUST00000217829 639 ntBASIC12.63□□□□□ -0.39
Smurf1Q9CUN6 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smurf1Q9CUN6 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smurf1Q9CUN6 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smurf1Q9CUN6 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Smurf1Q9CUN6 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smurf1Q9CUN6 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.63□□□□□ -0.39
Smurf1Q9CUN6 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smurf1Q9CUN6 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Smurf1Q9CUN6 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smurf1Q9CUN6 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Smurf1Q9CUN6 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Smurf1Q9CUN6 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Smurf1Q9CUN6 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smurf1Q9CUN6 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smurf1Q9CUN6 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smurf1Q9CUN6 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smurf1Q9CUN6 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.61□□□□□ -0.39
Smurf1Q9CUN6 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smurf1Q9CUN6 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smurf1Q9CUN6 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smurf1Q9CUN6 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smurf1Q9CUN6 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Smurf1Q9CUN6 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smurf1Q9CUN6 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smurf1Q9CUN6 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smurf1Q9CUN6 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smurf1Q9CUN6 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms