Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RTRAFQ9CQE8 AC131743.5-201ENSMUST00000220775 1618 ntBASIC11.27□□□□□ -0.6
RTRAFQ9CQE8 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.27□□□□□ -0.6
RTRAFQ9CQE8 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
RTRAFQ9CQE8 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
RTRAFQ9CQE8 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
RTRAFQ9CQE8 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
RTRAFQ9CQE8 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.27□□□□□ -0.6
RTRAFQ9CQE8 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 Gm5253-201ENSMUST00000187104 1025 ntBASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 Gm7787-201ENSMUST00000216858 688 ntBASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 AC124569.2-201ENSMUST00000225998 818 ntBASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.27□□□□□ -0.61
RTRAFQ9CQE8 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Gm12644-201ENSMUST00000119935 606 ntBASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Gm2308-201ENSMUST00000166539 1004 ntBASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Gm4691-201ENSMUST00000182339 1000 ntBASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Gm9682-201ENSMUST00000197505 556 ntBASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Gm2451-201ENSMUST00000199447 999 ntBASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Gm10290-201ENSMUST00000200451 999 ntBASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RTRAFQ9CQE8 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RTRAFQ9CQE8 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms