Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC10.43□□□□□ -0.74
Chchd1Q9CQA6 Gm21814-202ENSMUST00000203277 873 ntBASIC10.43□□□□□ -0.74
Chchd1Q9CQA6 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC10.43□□□□□ -0.74
Chchd1Q9CQA6 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.43□□□□□ -0.74
Chchd1Q9CQA6 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC10.43□□□□□ -0.74
Chchd1Q9CQA6 AC093926.2-201ENSMUST00000214468 1228 ntBASIC10.43□□□□□ -0.74
Chchd1Q9CQA6 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chchd1Q9CQA6 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chchd1Q9CQA6 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Chchd1Q9CQA6 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chchd1Q9CQA6 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chchd1Q9CQA6 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chchd1Q9CQA6 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Chchd1Q9CQA6 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chchd1Q9CQA6 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chchd1Q9CQA6 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Chchd1Q9CQA6 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chchd1Q9CQA6 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chchd1Q9CQA6 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chchd1Q9CQA6 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chchd1Q9CQA6 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chchd1Q9CQA6 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Chchd1Q9CQA6 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 AC127349.1-201ENSMUST00000224590 266 ntBASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Chchd1Q9CQA6 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Gm37856-201ENSMUST00000191634 999 ntBASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Olfr286-202ENSMUST00000205305 969 ntBASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chchd1Q9CQA6 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms