Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Gm2260-201ENSMUST00000184965 657 ntBASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col25a1Q99MQ5 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Gm14665-201ENSMUST00000122294 557 ntBASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Gm44545-201ENSMUST00000208262 746 ntBASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Snora73a-201ENSMUST00000082453 205 ntBASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Col25a1Q99MQ5 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col25a1Q99MQ5 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.11
Col25a1Q99MQ5 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col25a1Q99MQ5 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.33□□□□□ -0.11
Col25a1Q99MQ5 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col25a1Q99MQ5 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col25a1Q99MQ5 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Col25a1Q99MQ5 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Col25a1Q99MQ5 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col25a1Q99MQ5 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col25a1Q99MQ5 Gm8546-201ENSMUST00000178288 1264 ntBASIC14.33□□□□□ -0.12
Col25a1Q99MQ5 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col25a1Q99MQ5 Gm18893-201ENSMUST00000198416 943 ntBASIC14.33□□□□□ -0.12
Col25a1Q99MQ5 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col25a1Q99MQ5 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col25a1Q99MQ5 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col25a1Q99MQ5 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.33□□□□□ -0.12
Col25a1Q99MQ5 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col25a1Q99MQ5 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col25a1Q99MQ5 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col25a1Q99MQ5 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Col25a1Q99MQ5 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Col25a1Q99MQ5 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Col25a1Q99MQ5 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col25a1Q99MQ5 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.33□□□□□ -0.12
Col25a1Q99MQ5 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col25a1Q99MQ5 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col25a1Q99MQ5 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col25a1Q99MQ5 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col25a1Q99MQ5 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col25a1Q99MQ5 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col25a1Q99MQ5 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col25a1Q99MQ5 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col25a1Q99MQ5 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col25a1Q99MQ5 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col25a1Q99MQ5 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col25a1Q99MQ5 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Col25a1Q99MQ5 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col25a1Q99MQ5 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms