Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Gm27331-201ENSMUST00000183705 60 ntBASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Gm37008-201ENSMUST00000195712 319 ntBASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Gm7783-201ENSMUST00000204795 781 ntBASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Gm29705-201ENSMUST00000212598 474 ntBASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Gm18473-201ENSMUST00000220543 868 ntBASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nkx6-1Q99MA9 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Gm44364-201ENSMUST00000198368 141 ntBASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Gm8598-201ENSMUST00000221184 836 ntBASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nkx6-1Q99MA9 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Gm1335-201ENSMUST00000121653 386 ntBASIC12.97□□□□□ -0.33
Nkx6-1Q99MA9 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms