Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.45□□□□□ -0.26
Cstf3Q99LI7 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Gm24158-201ENSMUST00000175263 71 ntBASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Gm29541-201ENSMUST00000191351 678 ntBASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf3Q99LI7 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cstf3Q99LI7 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Gm2445-201ENSMUST00000182798 989 ntBASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.44□□□□□ -0.26
Cstf3Q99LI7 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.44□□□□□ -0.26
Cstf3Q99LI7 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Cstf3Q99LI7 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf3Q99LI7 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf3Q99LI7 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf3Q99LI7 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf3Q99LI7 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf3Q99LI7 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf3Q99LI7 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf3Q99LI7 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Cstf3Q99LI7 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.43□□□□□ -0.26
Cstf3Q99LI7 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Cstf3Q99LI7 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf3Q99LI7 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.43□□□□□ -0.26
Cstf3Q99LI7 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf3Q99LI7 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf3Q99LI7 Gm14822-201ENSMUST00000122247 291 ntBASIC13.43□□□□□ -0.26
Cstf3Q99LI7 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.43□□□□□ -0.26
Cstf3Q99LI7 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf3Q99LI7 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.43□□□□□ -0.26
Cstf3Q99LI7 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf3Q99LI7 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.43□□□□□ -0.26
Cstf3Q99LI7 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf3Q99LI7 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf3Q99LI7 Gm2756-201ENSMUST00000195851 400 ntBASIC13.43□□□□□ -0.26
Cstf3Q99LI7 Gm2213-201ENSMUST00000197485 688 ntBASIC13.43□□□□□ -0.26
Cstf3Q99LI7 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Cstf3Q99LI7 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf3Q99LI7 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf3Q99LI7 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Cstf3Q99LI7 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf3Q99LI7 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf3Q99LI7 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf3Q99LI7 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cstf3Q99LI7 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Cstf3Q99LI7 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.43□□□□□ -0.26
Cstf3Q99LI7 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms