Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lysmd3Q99LE3 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.42□□□□□ -0.1
Lysmd3Q99LE3 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.42□□□□□ -0.1
Lysmd3Q99LE3 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.42□□□□□ -0.1
Lysmd3Q99LE3 Gm5279-201ENSMUST00000199575 745 ntBASIC14.42□□□□□ -0.1
Lysmd3Q99LE3 Gm18905-201ENSMUST00000205454 928 ntBASIC14.42□□□□□ -0.1
Lysmd3Q99LE3 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Lysmd3Q99LE3 Gm19220-201ENSMUST00000222682 803 ntBASIC14.42□□□□□ -0.1
Lysmd3Q99LE3 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lysmd3Q99LE3 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lysmd3Q99LE3 Gm15823-201ENSMUST00000064305 670 ntBASIC14.42□□□□□ -0.1
Lysmd3Q99LE3 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lysmd3Q99LE3 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lysmd3Q99LE3 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lysmd3Q99LE3 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lysmd3Q99LE3 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lysmd3Q99LE3 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lysmd3Q99LE3 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Lysmd3Q99LE3 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lysmd3Q99LE3 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Lysmd3Q99LE3 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Gm5354-201ENSMUST00000182417 973 ntBASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Gm29741-201ENSMUST00000192667 421 ntBASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Gm8515-201ENSMUST00000194852 576 ntBASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Gm9794-201ENSMUST00000202370 423 ntBASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Gm45668-201ENSMUST00000211271 493 ntBASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Gm6180-201ENSMUST00000065243 498 ntBASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Lysmd3Q99LE3 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lysmd3Q99LE3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lysmd3Q99LE3 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lysmd3Q99LE3 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lysmd3Q99LE3 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.4□□□□□ -0.1
Lysmd3Q99LE3 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lysmd3Q99LE3 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lysmd3Q99LE3 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lysmd3Q99LE3 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
Lysmd3Q99LE3 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.4□□□□□ -0.1
Lysmd3Q99LE3 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Lysmd3Q99LE3 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Lysmd3Q99LE3 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.4□□□□□ -0.1
Lysmd3Q99LE3 Gm12091-201ENSMUST00000146791 830 ntBASIC14.4□□□□□ -0.1
Lysmd3Q99LE3 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Lysmd3Q99LE3 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.4□□□□□ -0.1
Lysmd3Q99LE3 Gm5745-201ENSMUST00000183748 313 ntBASIC14.4□□□□□ -0.1
Lysmd3Q99LE3 Gm18018-201ENSMUST00000198273 408 ntBASIC14.4□□□□□ -0.1
Lysmd3Q99LE3 Gm6745-201ENSMUST00000199216 526 ntBASIC14.4□□□□□ -0.1
Lysmd3Q99LE3 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Lysmd3Q99LE3 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.4□□□□□ -0.1
Lysmd3Q99LE3 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.4□□□□□ -0.1
Lysmd3Q99LE3 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lysmd3Q99LE3 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
Lysmd3Q99LE3 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lysmd3Q99LE3 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lysmd3Q99LE3 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lysmd3Q99LE3 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lysmd3Q99LE3 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.4□□□□□ -0.1
Lysmd3Q99LE3 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lysmd3Q99LE3 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lysmd3Q99LE3 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.4□□□□□ -0.1
Lysmd3Q99LE3 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lysmd3Q99LE3 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lysmd3Q99LE3 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lysmd3Q99LE3 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lysmd3Q99LE3 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lysmd3Q99LE3 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Lysmd3Q99LE3 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lysmd3Q99LE3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Lysmd3Q99LE3 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lysmd3Q99LE3 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Lysmd3Q99LE3 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms