Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Gm43125-201ENSMUST00000201724 730 ntBASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga11Q91XY8 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Gm13616-201ENSMUST00000120600 222 ntBASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Gm43474-201ENSMUST00000196415 774 ntBASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.44□□□□□ -0.26
Pcdhga11Q91XY8 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhga11Q91XY8 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga11Q91XY8 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga11Q91XY8 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga11Q91XY8 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga11Q91XY8 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga11Q91XY8 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga11Q91XY8 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga11Q91XY8 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga11Q91XY8 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga11Q91XY8 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga11Q91XY8 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.43□□□□□ -0.26
Pcdhga11Q91XY8 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhga11Q91XY8 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhga11Q91XY8 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.43□□□□□ -0.26
Pcdhga11Q91XY8 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.43□□□□□ -0.26
Pcdhga11Q91XY8 Gm13823-201ENSMUST00000119930 345 ntBASIC13.43□□□□□ -0.26
Pcdhga11Q91XY8 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.43□□□□□ -0.26
Pcdhga11Q91XY8 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.43□□□□□ -0.26
Pcdhga11Q91XY8 AA543401-201ENSMUST00000164248 1269 ntBASIC13.43□□□□□ -0.26
Pcdhga11Q91XY8 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.43□□□□□ -0.26
Pcdhga11Q91XY8 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms