Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhga6Q91XY2 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhga6Q91XY2 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhga6Q91XY2 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhga6Q91XY2 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhga6Q91XY2 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhga6Q91XY2 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhga6Q91XY2 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhga6Q91XY2 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhga6Q91XY2 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhga6Q91XY2 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pcdhga6Q91XY2 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Gm13464-201ENSMUST00000119418 935 ntBASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Gm43179-201ENSMUST00000198797 275 ntBASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdhga6Q91XY2 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhga6Q91XY2 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhga6Q91XY2 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhga6Q91XY2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhga6Q91XY2 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhga6Q91XY2 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhga6Q91XY2 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhga6Q91XY2 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhga6Q91XY2 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhga6Q91XY2 Gm12134-201ENSMUST00000122109 520 ntBASIC13.84□□□□□ -0.19
Pcdhga6Q91XY2 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.84□□□□□ -0.19
Pcdhga6Q91XY2 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.84□□□□□ -0.19
Pcdhga6Q91XY2 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.84□□□□□ -0.19
Pcdhga6Q91XY2 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhga6Q91XY2 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.84□□□□□ -0.19
Pcdhga6Q91XY2 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Pcdhga6Q91XY2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.84□□□□□ -0.19
Pcdhga6Q91XY2 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhga6Q91XY2 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.84□□□□□ -0.19
Pcdhga6Q91XY2 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Pcdhga6Q91XY2 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhga6Q91XY2 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Pcdhga6Q91XY2 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhga6Q91XY2 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdhga6Q91XY2 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdhga6Q91XY2 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdhga6Q91XY2 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdhga6Q91XY2 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdhga6Q91XY2 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Pcdhga6Q91XY2 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdhga6Q91XY2 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdhga6Q91XY2 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdhga6Q91XY2 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pcdhga6Q91XY2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhga6Q91XY2 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhga6Q91XY2 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhga6Q91XY2 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhga6Q91XY2 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhga6Q91XY2 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pcdhga6Q91XY2 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhga6Q91XY2 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhga6Q91XY2 Gm15460-201ENSMUST00000118147 391 ntBASIC13.83□□□□□ -0.2
Pcdhga6Q91XY2 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.83□□□□□ -0.2
Pcdhga6Q91XY2 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.83□□□□□ -0.2
Pcdhga6Q91XY2 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.83□□□□□ -0.2
Pcdhga6Q91XY2 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pcdhga6Q91XY2 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.83□□□□□ -0.2
Pcdhga6Q91XY2 Gm5279-201ENSMUST00000199575 745 ntBASIC13.83□□□□□ -0.2
Pcdhga6Q91XY2 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.83□□□□□ -0.2
Pcdhga6Q91XY2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhga6Q91XY2 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms