Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm1Q8VC85 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm1Q8VC85 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.33□□□□□ -0.28
Lsm1Q8VC85 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.33□□□□□ -0.28
Lsm1Q8VC85 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm1Q8VC85 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.33□□□□□ -0.28
Lsm1Q8VC85 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Gm44335-201ENSMUST00000196879 141 ntBASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Gm44297-201ENSMUST00000198304 141 ntBASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Gm44346-201ENSMUST00000198851 141 ntBASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Grk6-205ENSMUST00000224653 2976 ntBASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Dupd1-202ENSMUST00000224735 548 ntBASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm1Q8VC85 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm22065-201ENSMUST00000103753 110 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm22066-201ENSMUST00000103761 110 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm24932-201ENSMUST00000103763 110 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm24115-201ENSMUST00000103799 110 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm22190-201ENSMUST00000103827 110 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm22191-201ENSMUST00000103831 110 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm24721-201ENSMUST00000103849 110 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm28018-201ENSMUST00000103869 110 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm26399-201ENSMUST00000103937 110 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm12428-201ENSMUST00000119844 727 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm25349-201ENSMUST00000177728 110 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm23616-201ENSMUST00000177797 110 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm25871-201ENSMUST00000177816 110 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm24752-201ENSMUST00000178240 110 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm24496-201ENSMUST00000178287 110 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm25649-201ENSMUST00000178476 110 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm25548-201ENSMUST00000178681 110 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm23147-201ENSMUST00000178841 110 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm26095-201ENSMUST00000179270 110 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm22171-201ENSMUST00000179283 110 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm23936-201ENSMUST00000179354 110 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm22619-201ENSMUST00000179516 110 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm25255-201ENSMUST00000179579 110 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm24755-201ENSMUST00000179691 110 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm26506-201ENSMUST00000179692 110 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm25086-201ENSMUST00000179931 110 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm23243-201ENSMUST00000180047 110 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm24659-201ENSMUST00000180212 110 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm24169-201ENSMUST00000180244 110 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm23689-201ENSMUST00000180354 110 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm27359-201ENSMUST00000184153 110 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm27785-201ENSMUST00000184268 110 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm27466-201ENSMUST00000184396 110 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm27703-201ENSMUST00000184836 110 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 Gm43474-201ENSMUST00000196415 774 ntBASIC13.31□□□□□ -0.28
Lsm1Q8VC85 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms