Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rpp40Q8R1F9 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.86□□□□□ -0.03
Rpp40Q8R1F9 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.86□□□□□ -0.03
Rpp40Q8R1F9 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rpp40Q8R1F9 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rpp40Q8R1F9 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rpp40Q8R1F9 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rpp40Q8R1F9 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rpp40Q8R1F9 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rpp40Q8R1F9 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rpp40Q8R1F9 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rpp40Q8R1F9 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.85□□□□□ -0.03
Rpp40Q8R1F9 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Rpp40Q8R1F9 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rpp40Q8R1F9 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rpp40Q8R1F9 Gm12341-201ENSMUST00000119724 503 ntBASIC14.85□□□□□ -0.03
Rpp40Q8R1F9 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rpp40Q8R1F9 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.85□□□□□ -0.03
Rpp40Q8R1F9 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.85□□□□□ -0.03
Rpp40Q8R1F9 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rpp40Q8R1F9 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rpp40Q8R1F9 Gm43094-201ENSMUST00000196549 921 ntBASIC14.85□□□□□ -0.03
Rpp40Q8R1F9 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.85□□□□□ -0.03
Rpp40Q8R1F9 Gm6180-201ENSMUST00000065243 498 ntBASIC14.85□□□□□ -0.03
Rpp40Q8R1F9 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rpp40Q8R1F9 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rpp40Q8R1F9 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Rpp40Q8R1F9 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.85□□□□□ -0.03
Rpp40Q8R1F9 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.85□□□□□ -0.03
Rpp40Q8R1F9 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rpp40Q8R1F9 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Rpp40Q8R1F9 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rpp40Q8R1F9 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.85□□□□□ -0.03
Rpp40Q8R1F9 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rpp40Q8R1F9 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.85□□□□□ -0.03
Rpp40Q8R1F9 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rpp40Q8R1F9 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rpp40Q8R1F9 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.84□□□□□ -0.03
Rpp40Q8R1F9 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rpp40Q8R1F9 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rpp40Q8R1F9 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Rpp40Q8R1F9 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rpp40Q8R1F9 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rpp40Q8R1F9 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Rpp40Q8R1F9 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rpp40Q8R1F9 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.84□□□□□ -0.03
Rpp40Q8R1F9 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rpp40Q8R1F9 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.84□□□□□ -0.03
Rpp40Q8R1F9 Gm23984-201ENSMUST00000157139 203 ntBASIC14.84□□□□□ -0.03
Rpp40Q8R1F9 Gm27772-201ENSMUST00000184900 187 ntBASIC14.84□□□□□ -0.03
Rpp40Q8R1F9 Mir6392-201ENSMUST00000184924 108 ntBASIC14.84□□□□□ -0.03
Rpp40Q8R1F9 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rpp40Q8R1F9 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.84□□□□□ -0.03
Rpp40Q8R1F9 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.84□□□□□ -0.03
Rpp40Q8R1F9 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Rpp40Q8R1F9 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rpp40Q8R1F9 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.84□□□□□ -0.03
Rpp40Q8R1F9 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.84□□□□□ -0.03
Rpp40Q8R1F9 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rpp40Q8R1F9 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rpp40Q8R1F9 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rpp40Q8R1F9 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.84□□□□□ -0.03
Rpp40Q8R1F9 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Rpp40Q8R1F9 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.83□□□□□ -0.03
Rpp40Q8R1F9 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Rpp40Q8R1F9 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Rpp40Q8R1F9 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rpp40Q8R1F9 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Rpp40Q8R1F9 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
Rpp40Q8R1F9 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Rpp40Q8R1F9 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rpp40Q8R1F9 Gm15376-201ENSMUST00000122258 783 ntBASIC14.83□□□□□ -0.04
Rpp40Q8R1F9 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.83□□□□□ -0.04
Rpp40Q8R1F9 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.83□□□□□ -0.04
Rpp40Q8R1F9 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Rpp40Q8R1F9 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Rpp40Q8R1F9 Gm19078-201ENSMUST00000206311 727 ntBASIC14.83□□□□□ -0.04
Rpp40Q8R1F9 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rpp40Q8R1F9 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.83□□□□□ -0.04
Rpp40Q8R1F9 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.83□□□□□ -0.04
Rpp40Q8R1F9 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rpp40Q8R1F9 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Rpp40Q8R1F9 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rpp40Q8R1F9 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rpp40Q8R1F9 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rpp40Q8R1F9 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Rpp40Q8R1F9 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Rpp40Q8R1F9 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rpp40Q8R1F9 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Rpp40Q8R1F9 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rpp40Q8R1F9 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rpp40Q8R1F9 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Rpp40Q8R1F9 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rpp40Q8R1F9 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rpp40Q8R1F9 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rpp40Q8R1F9 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.83□□□□□ -0.04
Rpp40Q8R1F9 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rpp40Q8R1F9 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rpp40Q8R1F9 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rpp40Q8R1F9 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms