Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx54Q8K4L0 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx54Q8K4L0 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx54Q8K4L0 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx54Q8K4L0 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx54Q8K4L0 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx54Q8K4L0 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ddx54Q8K4L0 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Ddx54Q8K4L0 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC18.03■□□□□ 0.48
Ddx54Q8K4L0 Gm9431-201ENSMUST00000119765 1051 ntBASIC18.03■□□□□ 0.48
Ddx54Q8K4L0 Gm12201-201ENSMUST00000120657 1234 ntBASIC18.03■□□□□ 0.48
Ddx54Q8K4L0 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Ddx54Q8K4L0 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx54Q8K4L0 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC18.03■□□□□ 0.48
Ddx54Q8K4L0 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Ddx54Q8K4L0 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx54Q8K4L0 Gm2260-201ENSMUST00000184965 657 ntBASIC18.03■□□□□ 0.48
Ddx54Q8K4L0 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC18.03■□□□□ 0.48
Ddx54Q8K4L0 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
Ddx54Q8K4L0 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx54Q8K4L0 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx54Q8K4L0 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx54Q8K4L0 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx54Q8K4L0 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Ddx54Q8K4L0 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx54Q8K4L0 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx54Q8K4L0 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx54Q8K4L0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx54Q8K4L0 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ddx54Q8K4L0 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC18.03■□□□□ 0.48
Ddx54Q8K4L0 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Ddx54Q8K4L0 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx54Q8K4L0 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx54Q8K4L0 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx54Q8K4L0 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC18.02■□□□□ 0.48
Ddx54Q8K4L0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx54Q8K4L0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx54Q8K4L0 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC18.02■□□□□ 0.48
Ddx54Q8K4L0 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Ddx54Q8K4L0 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC18.02■□□□□ 0.48
Ddx54Q8K4L0 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Ddx54Q8K4L0 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC18.02■□□□□ 0.48
Ddx54Q8K4L0 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC18.02■□□□□ 0.48
Ddx54Q8K4L0 AC134254.1-201ENSMUST00000221362 167 ntBASIC18.02■□□□□ 0.48
Ddx54Q8K4L0 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx54Q8K4L0 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx54Q8K4L0 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx54Q8K4L0 Gm16372-201ENSMUST00000073088 450 ntBASIC18.02■□□□□ 0.48
Ddx54Q8K4L0 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx54Q8K4L0 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx54Q8K4L0 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ddx54Q8K4L0 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Ddx54Q8K4L0 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Ddx54Q8K4L0 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ddx54Q8K4L0 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Gm24830-201ENSMUST00000102024 166 ntBASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Gm4909-201ENSMUST00000118749 794 ntBASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Gm12566-201ENSMUST00000121479 359 ntBASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Gm13123-201ENSMUST00000122173 492 ntBASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Gm25890-201ENSMUST00000177643 165 ntBASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Rnu1b2-201ENSMUST00000178073 165 ntBASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Rnu1b1-201ENSMUST00000178250 165 ntBASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Gm22614-201ENSMUST00000178300 165 ntBASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Mir7032-201ENSMUST00000185154 79 ntBASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Gm43830-201ENSMUST00000198760 1067 ntBASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Gm22042-201ENSMUST00000082989 165 ntBASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Gm26232-201ENSMUST00000083360 166 ntBASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Gm24136-201ENSMUST00000083374 165 ntBASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Rnu1b6-201ENSMUST00000083839 166 ntBASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Gm26110-201ENSMUST00000083971 165 ntBASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ddx54Q8K4L0 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx54Q8K4L0 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Ddx54Q8K4L0 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx54Q8K4L0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx54Q8K4L0 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ddx54Q8K4L0 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Ddx54Q8K4L0 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18■□□□□ 0.47
Ddx54Q8K4L0 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms