Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Clrn1Q8K445 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clrn1Q8K445 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clrn1Q8K445 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Clrn1Q8K445 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Clrn1Q8K445 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Clrn1Q8K445 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clrn1Q8K445 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Clrn1Q8K445 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.12□□□□□ -0.31
Clrn1Q8K445 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clrn1Q8K445 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clrn1Q8K445 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clrn1Q8K445 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Clrn1Q8K445 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Clrn1Q8K445 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Clrn1Q8K445 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.12□□□□□ -0.31
Clrn1Q8K445 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.12□□□□□ -0.31
Clrn1Q8K445 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.12□□□□□ -0.31
Clrn1Q8K445 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Clrn1Q8K445 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clrn1Q8K445 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Clrn1Q8K445 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clrn1Q8K445 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clrn1Q8K445 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clrn1Q8K445 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clrn1Q8K445 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Clrn1Q8K445 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clrn1Q8K445 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clrn1Q8K445 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clrn1Q8K445 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Clrn1Q8K445 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clrn1Q8K445 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Clrn1Q8K445 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Clrn1Q8K445 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Clrn1Q8K445 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.12□□□□□ -0.31
Clrn1Q8K445 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Clrn1Q8K445 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn1Q8K445 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn1Q8K445 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn1Q8K445 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Clrn1Q8K445 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn1Q8K445 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Clrn1Q8K445 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.11□□□□□ -0.31
Clrn1Q8K445 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn1Q8K445 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.11□□□□□ -0.31
Clrn1Q8K445 Gm15920-201ENSMUST00000118998 402 ntBASIC13.11□□□□□ -0.31
Clrn1Q8K445 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn1Q8K445 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.11□□□□□ -0.31
Clrn1Q8K445 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn1Q8K445 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn1Q8K445 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn1Q8K445 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn1Q8K445 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn1Q8K445 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn1Q8K445 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn1Q8K445 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn1Q8K445 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn1Q8K445 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn1Q8K445 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn1Q8K445 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.11□□□□□ -0.31
Clrn1Q8K445 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn1Q8K445 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Clrn1Q8K445 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn1Q8K445 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn1Q8K445 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Clrn1Q8K445 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.1□□□□□ -0.31
Clrn1Q8K445 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn1Q8K445 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn1Q8K445 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn1Q8K445 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn1Q8K445 Acot6-202ENSMUST00000222921 3622 ntBASIC13.1□□□□□ -0.31
Clrn1Q8K445 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn1Q8K445 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn1Q8K445 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.1□□□□□ -0.31
Clrn1Q8K445 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn1Q8K445 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn1Q8K445 Gm15393-201ENSMUST00000120499 219 ntBASIC13.1□□□□□ -0.31
Clrn1Q8K445 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn1Q8K445 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.1□□□□□ -0.31
Clrn1Q8K445 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.1□□□□□ -0.31
Clrn1Q8K445 Gm3436-201ENSMUST00000179930 840 ntBASIC13.1□□□□□ -0.31
Clrn1Q8K445 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.1□□□□□ -0.31
Clrn1Q8K445 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.1□□□□□ -0.31
Clrn1Q8K445 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn1Q8K445 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn1Q8K445 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn1Q8K445 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn1Q8K445 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn1Q8K445 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn1Q8K445 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn1Q8K445 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn1Q8K445 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn1Q8K445 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.1□□□□□ -0.31
Clrn1Q8K445 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn1Q8K445 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn1Q8K445 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Clrn1Q8K445 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn1Q8K445 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Clrn1Q8K445 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Clrn1Q8K445 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms