Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rab11fip3Q8CHD8 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rab11fip3Q8CHD8 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rab11fip3Q8CHD8 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Rab11fip3Q8CHD8 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC17.92■□□□□ 0.46
Rab11fip3Q8CHD8 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
Rab11fip3Q8CHD8 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rab11fip3Q8CHD8 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rab11fip3Q8CHD8 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Rab11fip3Q8CHD8 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rab11fip3Q8CHD8 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rab11fip3Q8CHD8 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rab11fip3Q8CHD8 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rab11fip3Q8CHD8 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Rab11fip3Q8CHD8 Gm11814-201ENSMUST00000119515 929 ntBASIC17.91■□□□□ 0.46
Rab11fip3Q8CHD8 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC17.91■□□□□ 0.46
Rab11fip3Q8CHD8 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC17.91■□□□□ 0.46
Rab11fip3Q8CHD8 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC17.91■□□□□ 0.46
Rab11fip3Q8CHD8 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC17.91■□□□□ 0.46
Rab11fip3Q8CHD8 Gm42550-201ENSMUST00000201553 960 ntBASIC17.91■□□□□ 0.46
Rab11fip3Q8CHD8 Gm18062-201ENSMUST00000208020 547 ntBASIC17.91■□□□□ 0.46
Rab11fip3Q8CHD8 Gm18055-201ENSMUST00000208254 547 ntBASIC17.91■□□□□ 0.46
Rab11fip3Q8CHD8 Gm17330-201ENSMUST00000221047 165 ntBASIC17.91■□□□□ 0.46
Rab11fip3Q8CHD8 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rab11fip3Q8CHD8 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rab11fip3Q8CHD8 Gm15222-202ENSMUST00000228667 1726 ntBASIC17.91■□□□□ 0.46
Rab11fip3Q8CHD8 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rab11fip3Q8CHD8 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rab11fip3Q8CHD8 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rab11fip3Q8CHD8 Zkscan14-203ENSMUST00000198959 2243 ntBASIC17.91■□□□□ 0.46
Rab11fip3Q8CHD8 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rab11fip3Q8CHD8 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rab11fip3Q8CHD8 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rab11fip3Q8CHD8 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rab11fip3Q8CHD8 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rab11fip3Q8CHD8 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rab11fip3Q8CHD8 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Gm12020-201ENSMUST00000119030 2042 ntBASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Gm4984-201ENSMUST00000115987 360 ntBASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Gm15770-201ENSMUST00000117498 584 ntBASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Nupl1-207ENSMUST00000225311 2475 ntBASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rab11fip3Q8CHD8 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rab11fip3Q8CHD8 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rab11fip3Q8CHD8 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC17.89■□□□□ 0.45
Rab11fip3Q8CHD8 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rab11fip3Q8CHD8 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rab11fip3Q8CHD8 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rab11fip3Q8CHD8 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rab11fip3Q8CHD8 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.89■□□□□ 0.45
Rab11fip3Q8CHD8 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rab11fip3Q8CHD8 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rab11fip3Q8CHD8 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rab11fip3Q8CHD8 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rab11fip3Q8CHD8 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rab11fip3Q8CHD8 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rab11fip3Q8CHD8 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC17.89■□□□□ 0.45
Rab11fip3Q8CHD8 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rab11fip3Q8CHD8 Gm38144-201ENSMUST00000192790 465 ntBASIC17.89■□□□□ 0.45
Rab11fip3Q8CHD8 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rab11fip3Q8CHD8 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Rab11fip3Q8CHD8 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Rab11fip3Q8CHD8 Gm8337-201ENSMUST00000187358 1938 ntBASIC17.89■□□□□ 0.45
Rab11fip3Q8CHD8 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC17.89■□□□□ 0.45
Rab11fip3Q8CHD8 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rab11fip3Q8CHD8 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC17.89■□□□□ 0.45
Rab11fip3Q8CHD8 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rab11fip3Q8CHD8 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rab11fip3Q8CHD8 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rab11fip3Q8CHD8 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms