Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Gm16476-201ENSMUST00000221544 139 ntBASIC17.16■□□□□ 0.34
Smc5Q8CG46 Dupd1-202ENSMUST00000224735 548 ntBASIC17.16■□□□□ 0.34
Smc5Q8CG46 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC17.16■□□□□ 0.34
Smc5Q8CG46 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc5Q8CG46 Gm5939-201ENSMUST00000119613 2874 ntBASIC17.16■□□□□ 0.34
Smc5Q8CG46 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smc5Q8CG46 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc5Q8CG46 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc5Q8CG46 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Smc5Q8CG46 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc5Q8CG46 Gm43423-201ENSMUST00000198390 2094 ntBASIC17.16■□□□□ 0.34
Smc5Q8CG46 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc5Q8CG46 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smc5Q8CG46 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Smc5Q8CG46 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc5Q8CG46 AC139350.1-201ENSMUST00000227064 1594 ntBASIC17.15■□□□□ 0.34
Smc5Q8CG46 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Smc5Q8CG46 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smc5Q8CG46 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smc5Q8CG46 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc5Q8CG46 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc5Q8CG46 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc5Q8CG46 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smc5Q8CG46 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Smc5Q8CG46 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.15■□□□□ 0.34
Smc5Q8CG46 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.15■□□□□ 0.34
Smc5Q8CG46 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smc5Q8CG46 Gm6916-202ENSMUST00000205523 195 ntBASIC17.15■□□□□ 0.34
Smc5Q8CG46 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.15■□□□□ 0.34
Smc5Q8CG46 Gm18206-201ENSMUST00000207027 926 ntBASIC17.15■□□□□ 0.34
Smc5Q8CG46 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc5Q8CG46 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc5Q8CG46 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smc5Q8CG46 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Smc5Q8CG46 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc5Q8CG46 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc5Q8CG46 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc5Q8CG46 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc5Q8CG46 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc5Q8CG46 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc5Q8CG46 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc5Q8CG46 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc5Q8CG46 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc5Q8CG46 Gm8775-201ENSMUST00000170943 1327 ntBASIC17.15■□□□□ 0.34
Smc5Q8CG46 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc5Q8CG46 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc5Q8CG46 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc5Q8CG46 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc5Q8CG46 Gm7002-201ENSMUST00000221386 2165 ntBASIC17.15■□□□□ 0.34
Smc5Q8CG46 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC17.15■□□□□ 0.34
Smc5Q8CG46 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Smc5Q8CG46 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc5Q8CG46 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smc5Q8CG46 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.34
Smc5Q8CG46 Ssr1-203ENSMUST00000225246 1825 ntBASIC17.14■□□□□ 0.34
Smc5Q8CG46 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc5Q8CG46 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.14■□□□□ 0.33
Smc5Q8CG46 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smc5Q8CG46 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.14■□□□□ 0.33
Smc5Q8CG46 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Smc5Q8CG46 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Smc5Q8CG46 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smc5Q8CG46 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smc5Q8CG46 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms