Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Brf1Q8CFK2 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Brf1Q8CFK2 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Brf1Q8CFK2 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Brf1Q8CFK2 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Brf1Q8CFK2 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Brf1Q8CFK2 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Brf1Q8CFK2 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.75■□□□□ 0.27
Brf1Q8CFK2 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Brf1Q8CFK2 AC166491.1-201ENSMUST00000227053 2308 ntBASIC16.75■□□□□ 0.27
Brf1Q8CFK2 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.75■□□□□ 0.27
Brf1Q8CFK2 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Brf1Q8CFK2 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Brf1Q8CFK2 Gm8337-201ENSMUST00000187358 1938 ntBASIC16.75■□□□□ 0.27
Brf1Q8CFK2 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Brf1Q8CFK2 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Brf1Q8CFK2 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Brf1Q8CFK2 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Brf1Q8CFK2 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.75■□□□□ 0.27
Brf1Q8CFK2 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.75■□□□□ 0.27
Brf1Q8CFK2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Brf1Q8CFK2 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC16.75■□□□□ 0.27
Brf1Q8CFK2 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Brf1Q8CFK2 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Brf1Q8CFK2 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Brf1Q8CFK2 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Brf1Q8CFK2 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Brf1Q8CFK2 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Brf1Q8CFK2 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Brf1Q8CFK2 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Brf1Q8CFK2 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Brf1Q8CFK2 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Brf1Q8CFK2 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Brf1Q8CFK2 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Brf1Q8CFK2 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Brf1Q8CFK2 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Brf1Q8CFK2 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Brf1Q8CFK2 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Brf1Q8CFK2 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
Brf1Q8CFK2 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Brf1Q8CFK2 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Brf1Q8CFK2 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Brf1Q8CFK2 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Brf1Q8CFK2 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Brf1Q8CFK2 Mir698-201ENSMUST00000102164 109 ntBASIC16.74■□□□□ 0.27
Brf1Q8CFK2 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Brf1Q8CFK2 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.74■□□□□ 0.27
Brf1Q8CFK2 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.74■□□□□ 0.27
Brf1Q8CFK2 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Brf1Q8CFK2 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Brf1Q8CFK2 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Brf1Q8CFK2 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Brf1Q8CFK2 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Brf1Q8CFK2 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.74■□□□□ 0.27
Brf1Q8CFK2 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Brf1Q8CFK2 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Brf1Q8CFK2 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Brf1Q8CFK2 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Brf1Q8CFK2 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Brf1Q8CFK2 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Brf1Q8CFK2 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Gm14057-201ENSMUST00000120631 482 ntBASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Gm20445-201ENSMUST00000061905 565 ntBASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Brf1Q8CFK2 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Brf1Q8CFK2 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Brf1Q8CFK2 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Brf1Q8CFK2 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Brf1Q8CFK2 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms