Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc28bQ8CEG5 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc28bQ8CEG5 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc28bQ8CEG5 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc28bQ8CEG5 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc28bQ8CEG5 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.73□□□□□ -0.21
Ccdc28bQ8CEG5 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc28bQ8CEG5 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Ccdc28bQ8CEG5 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc28bQ8CEG5 Gm12882-201ENSMUST00000121696 517 ntBASIC13.73□□□□□ -0.21
Ccdc28bQ8CEG5 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc28bQ8CEG5 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc28bQ8CEG5 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc28bQ8CEG5 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.73□□□□□ -0.21
Ccdc28bQ8CEG5 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.73□□□□□ -0.21
Ccdc28bQ8CEG5 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.73□□□□□ -0.21
Ccdc28bQ8CEG5 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Ccdc28bQ8CEG5 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc28bQ8CEG5 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc28bQ8CEG5 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc28bQ8CEG5 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc28bQ8CEG5 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc28bQ8CEG5 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.73□□□□□ -0.21
Ccdc28bQ8CEG5 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc28bQ8CEG5 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc28bQ8CEG5 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc28bQ8CEG5 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Ccdc28bQ8CEG5 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc28bQ8CEG5 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc28bQ8CEG5 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc28bQ8CEG5 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc28bQ8CEG5 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc28bQ8CEG5 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc28bQ8CEG5 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc28bQ8CEG5 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ccdc28bQ8CEG5 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc28bQ8CEG5 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc28bQ8CEG5 Gm24589-201ENSMUST00000116692 94 ntBASIC13.72□□□□□ -0.21
Ccdc28bQ8CEG5 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc28bQ8CEG5 Gm27628-201ENSMUST00000184911 107 ntBASIC13.72□□□□□ -0.21
Ccdc28bQ8CEG5 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.72□□□□□ -0.21
Ccdc28bQ8CEG5 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.72□□□□□ -0.21
Ccdc28bQ8CEG5 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc28bQ8CEG5 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc28bQ8CEG5 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc28bQ8CEG5 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Ccdc28bQ8CEG5 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc28bQ8CEG5 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc28bQ8CEG5 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc28bQ8CEG5 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc28bQ8CEG5 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc28bQ8CEG5 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc28bQ8CEG5 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ccdc28bQ8CEG5 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc28bQ8CEG5 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ccdc28bQ8CEG5 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc28bQ8CEG5 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc28bQ8CEG5 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc28bQ8CEG5 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc28bQ8CEG5 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc28bQ8CEG5 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc28bQ8CEG5 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc28bQ8CEG5 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc28bQ8CEG5 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc28bQ8CEG5 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc28bQ8CEG5 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc28bQ8CEG5 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc28bQ8CEG5 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc28bQ8CEG5 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc28bQ8CEG5 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc28bQ8CEG5 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Ccdc28bQ8CEG5 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc28bQ8CEG5 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc28bQ8CEG5 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc28bQ8CEG5 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc28bQ8CEG5 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc28bQ8CEG5 Gm27301-201ENSMUST00000184012 127 ntBASIC13.71□□□□□ -0.21
Ccdc28bQ8CEG5 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.71□□□□□ -0.21
Ccdc28bQ8CEG5 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.71□□□□□ -0.21
Ccdc28bQ8CEG5 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.71□□□□□ -0.21
Ccdc28bQ8CEG5 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc28bQ8CEG5 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc28bQ8CEG5 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc28bQ8CEG5 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms