Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.75□□□□□ -0.05
Ccdc87Q8CDL9 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc87Q8CDL9 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc87Q8CDL9 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Ccdc87Q8CDL9 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ccdc87Q8CDL9 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.75□□□□□ -0.05
Ccdc87Q8CDL9 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccdc87Q8CDL9 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Gm43474-201ENSMUST00000196415 774 ntBASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Gm5312-201ENSMUST00000203728 547 ntBASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ccdc87Q8CDL9 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Ccdc87Q8CDL9 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc87Q8CDL9 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc87Q8CDL9 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc87Q8CDL9 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc87Q8CDL9 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc87Q8CDL9 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc87Q8CDL9 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc87Q8CDL9 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc87Q8CDL9 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Ccdc87Q8CDL9 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc87Q8CDL9 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc87Q8CDL9 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.72□□□□□ -0.05
Ccdc87Q8CDL9 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.72□□□□□ -0.05
Ccdc87Q8CDL9 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc87Q8CDL9 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc87Q8CDL9 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.72□□□□□ -0.05
Ccdc87Q8CDL9 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.72□□□□□ -0.05
Ccdc87Q8CDL9 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Ccdc87Q8CDL9 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms