Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf31Q8CCF0 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf31Q8CCF0 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf31Q8CCF0 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf31Q8CCF0 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.18■□□□□ 0.02
Prpf31Q8CCF0 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf31Q8CCF0 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf31Q8CCF0 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Prpf31Q8CCF0 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf31Q8CCF0 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf31Q8CCF0 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf31Q8CCF0 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf31Q8CCF0 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf31Q8CCF0 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf31Q8CCF0 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf31Q8CCF0 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf31Q8CCF0 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf31Q8CCF0 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Prpf31Q8CCF0 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Prpf31Q8CCF0 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
Prpf31Q8CCF0 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.17■□□□□ 0.02
Prpf31Q8CCF0 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf31Q8CCF0 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf31Q8CCF0 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf31Q8CCF0 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf31Q8CCF0 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
Prpf31Q8CCF0 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf31Q8CCF0 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf31Q8CCF0 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Prpf31Q8CCF0 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf31Q8CCF0 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf31Q8CCF0 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf31Q8CCF0 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Prpf31Q8CCF0 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf31Q8CCF0 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf31Q8CCF0 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf31Q8CCF0 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Prpf31Q8CCF0 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.16■□□□□ 0.02
Prpf31Q8CCF0 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf31Q8CCF0 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Prpf31Q8CCF0 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Prpf31Q8CCF0 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Prpf31Q8CCF0 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf31Q8CCF0 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Prpf31Q8CCF0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf31Q8CCF0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf31Q8CCF0 Mir698-201ENSMUST00000102164 109 ntBASIC15.15■□□□□ 0.02
Prpf31Q8CCF0 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Prpf31Q8CCF0 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf31Q8CCF0 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf31Q8CCF0 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Prpf31Q8CCF0 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
Prpf31Q8CCF0 Gm43094-201ENSMUST00000196549 921 ntBASIC15.15■□□□□ 0.02
Prpf31Q8CCF0 Gm4971-201ENSMUST00000205991 1108 ntBASIC15.15■□□□□ 0.02
Prpf31Q8CCF0 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf31Q8CCF0 Gm45384-201ENSMUST00000210451 277 ntBASIC15.15■□□□□ 0.02
Prpf31Q8CCF0 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Prpf31Q8CCF0 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf31Q8CCF0 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf31Q8CCF0 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf31Q8CCF0 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf31Q8CCF0 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Prpf31Q8CCF0 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms