Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vps53Q8CCB4 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps53Q8CCB4 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Vps53Q8CCB4 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps53Q8CCB4 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps53Q8CCB4 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps53Q8CCB4 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vps53Q8CCB4 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Vps53Q8CCB4 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC16.16■□□□□ 0.18
Vps53Q8CCB4 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps53Q8CCB4 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps53Q8CCB4 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps53Q8CCB4 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps53Q8CCB4 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps53Q8CCB4 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Vps53Q8CCB4 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps53Q8CCB4 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Ighv5-13-201ENSMUST00000193550 290 ntBASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps53Q8CCB4 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps53Q8CCB4 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
Vps53Q8CCB4 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Vps53Q8CCB4 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Vps53Q8CCB4 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.14■□□□□ 0.18
Vps53Q8CCB4 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps53Q8CCB4 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.14■□□□□ 0.17
Vps53Q8CCB4 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps53Q8CCB4 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps53Q8CCB4 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps53Q8CCB4 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps53Q8CCB4 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps53Q8CCB4 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps53Q8CCB4 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Vps53Q8CCB4 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC16.14■□□□□ 0.17
Vps53Q8CCB4 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vps53Q8CCB4 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC16.14■□□□□ 0.17
Vps53Q8CCB4 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Vps53Q8CCB4 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.14■□□□□ 0.17
Vps53Q8CCB4 Gm8515-201ENSMUST00000194852 576 ntBASIC16.14■□□□□ 0.17
Vps53Q8CCB4 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps53Q8CCB4 Gm20445-201ENSMUST00000061905 565 ntBASIC16.14■□□□□ 0.17
Vps53Q8CCB4 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps53Q8CCB4 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vps53Q8CCB4 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps53Q8CCB4 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.14■□□□□ 0.17
Vps53Q8CCB4 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC16.14■□□□□ 0.17
Vps53Q8CCB4 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.14■□□□□ 0.17
Vps53Q8CCB4 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps53Q8CCB4 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.14■□□□□ 0.17
Vps53Q8CCB4 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps53Q8CCB4 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps53Q8CCB4 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.14■□□□□ 0.17
Vps53Q8CCB4 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vps53Q8CCB4 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.14■□□□□ 0.17
Vps53Q8CCB4 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps53Q8CCB4 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps53Q8CCB4 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps53Q8CCB4 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Vps53Q8CCB4 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps53Q8CCB4 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps53Q8CCB4 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps53Q8CCB4 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps53Q8CCB4 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vps53Q8CCB4 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps53Q8CCB4 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Vps53Q8CCB4 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Vps53Q8CCB4 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Vps53Q8CCB4 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vps53Q8CCB4 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms