Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Gm12091-201ENSMUST00000146791 830 ntBASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Gm10359-201ENSMUST00000180167 1002 ntBASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Gm12033-201ENSMUST00000180654 1002 ntBASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Gm5559-201ENSMUST00000180755 1002 ntBASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Gm4335-201ENSMUST00000182581 1004 ntBASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.05■□□□□ 0.16
Shisa4Q8CA71 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Gm37133-201ENSMUST00000192705 1922 ntBASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Shisa4Q8CA71 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shisa4Q8CA71 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Shisa4Q8CA71 Gm14752-201ENSMUST00000120719 2075 ntBASIC16.04■□□□□ 0.16
Shisa4Q8CA71 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.04■□□□□ 0.16
Shisa4Q8CA71 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shisa4Q8CA71 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Shisa4Q8CA71 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shisa4Q8CA71 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.04■□□□□ 0.16
Shisa4Q8CA71 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shisa4Q8CA71 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shisa4Q8CA71 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Shisa4Q8CA71 Gm12485-201ENSMUST00000119641 291 ntBASIC16.04■□□□□ 0.16
Shisa4Q8CA71 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Shisa4Q8CA71 Gm27772-201ENSMUST00000184900 187 ntBASIC16.04■□□□□ 0.16
Shisa4Q8CA71 Mir6392-201ENSMUST00000184924 108 ntBASIC16.04■□□□□ 0.16
Shisa4Q8CA71 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC16.04■□□□□ 0.16
Shisa4Q8CA71 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC16.04■□□□□ 0.16
Shisa4Q8CA71 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shisa4Q8CA71 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Shisa4Q8CA71 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Shisa4Q8CA71 Gm24447-201ENSMUST00000083977 338 ntBASIC16.04■□□□□ 0.16
Shisa4Q8CA71 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shisa4Q8CA71 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shisa4Q8CA71 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Shisa4Q8CA71 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shisa4Q8CA71 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shisa4Q8CA71 AC139350.1-201ENSMUST00000227064 1594 ntBASIC16.04■□□□□ 0.16
Shisa4Q8CA71 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Shisa4Q8CA71 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.04■□□□□ 0.16
Shisa4Q8CA71 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shisa4Q8CA71 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shisa4Q8CA71 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shisa4Q8CA71 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.04■□□□□ 0.16
Shisa4Q8CA71 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.04■□□□□ 0.16
Shisa4Q8CA71 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Gm5912-201ENSMUST00000122282 1438 ntBASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Gm29608-201ENSMUST00000190444 463 ntBASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Gm19220-201ENSMUST00000222682 803 ntBASIC16.03■□□□□ 0.16
Shisa4Q8CA71 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Shisa4Q8CA71 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Shisa4Q8CA71 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.02■□□□□ 0.16
Shisa4Q8CA71 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Shisa4Q8CA71 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shisa4Q8CA71 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms