Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Uba3Q8C878 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Uba3Q8C878 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Uba3Q8C878 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Uba3Q8C878 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Uba3Q8C878 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Uba3Q8C878 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Uba3Q8C878 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Uba3Q8C878 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Uba3Q8C878 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.63□□□□□ -0.07
Uba3Q8C878 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Uba3Q8C878 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Uba3Q8C878 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Uba3Q8C878 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Uba3Q8C878 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.62□□□□□ -0.07
Uba3Q8C878 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Uba3Q8C878 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Uba3Q8C878 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Uba3Q8C878 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Uba3Q8C878 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Uba3Q8C878 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Uba3Q8C878 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Uba3Q8C878 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
Uba3Q8C878 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Uba3Q8C878 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Uba3Q8C878 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Uba3Q8C878 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Uba3Q8C878 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.62□□□□□ -0.07
Uba3Q8C878 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Uba3Q8C878 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.62□□□□□ -0.07
Uba3Q8C878 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Uba3Q8C878 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Uba3Q8C878 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Uba3Q8C878 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Uba3Q8C878 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Uba3Q8C878 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Uba3Q8C878 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.62□□□□□ -0.07
Uba3Q8C878 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Uba3Q8C878 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Uba3Q8C878 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Uba3Q8C878 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Uba3Q8C878 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Uba3Q8C878 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Uba3Q8C878 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Uba3Q8C878 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Uba3Q8C878 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Uba3Q8C878 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Uba3Q8C878 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Uba3Q8C878 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.61□□□□□ -0.07
Uba3Q8C878 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Uba3Q8C878 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Uba3Q8C878 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Uba3Q8C878 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Uba3Q8C878 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Uba3Q8C878 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Uba3Q8C878 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.61□□□□□ -0.07
Uba3Q8C878 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.61□□□□□ -0.07
Uba3Q8C878 Gm24694-201ENSMUST00000180054 110 ntBASIC14.61□□□□□ -0.07
Uba3Q8C878 Gm27663-201ENSMUST00000184839 110 ntBASIC14.61□□□□□ -0.07
Uba3Q8C878 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Uba3Q8C878 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.61□□□□□ -0.07
Uba3Q8C878 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Uba3Q8C878 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.61□□□□□ -0.07
Uba3Q8C878 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.61□□□□□ -0.07
Uba3Q8C878 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.61□□□□□ -0.07
Uba3Q8C878 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Uba3Q8C878 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Uba3Q8C878 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Uba3Q8C878 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Uba3Q8C878 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Uba3Q8C878 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Uba3Q8C878 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Uba3Q8C878 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Uba3Q8C878 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Uba3Q8C878 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Uba3Q8C878 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Uba3Q8C878 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Uba3Q8C878 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Uba3Q8C878 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
Uba3Q8C878 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Uba3Q8C878 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Uba3Q8C878 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.6□□□□□ -0.07
Uba3Q8C878 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Uba3Q8C878 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.6□□□□□ -0.07
Uba3Q8C878 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Uba3Q8C878 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.6□□□□□ -0.07
Uba3Q8C878 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Uba3Q8C878 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Uba3Q8C878 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Uba3Q8C878 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Uba3Q8C878 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Uba3Q8C878 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Uba3Q8C878 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
Uba3Q8C878 Gm44855-201ENSMUST00000205725 362 ntBASIC14.6□□□□□ -0.07
Uba3Q8C878 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Uba3Q8C878 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Uba3Q8C878 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Uba3Q8C878 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Uba3Q8C878 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Uba3Q8C878 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms