Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm13886-201ENSMUST00000117876 1183 ntBASIC19.49■□□□□ 0.71
Usp47Q8BY87 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC19.49■□□□□ 0.71
Usp47Q8BY87 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Usp47Q8BY87 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Usp47Q8BY87 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC19.49■□□□□ 0.71
Usp47Q8BY87 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
Usp47Q8BY87 Gm5356-201ENSMUST00000093326 615 ntBASIC19.49■□□□□ 0.71
Usp47Q8BY87 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp47Q8BY87 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp47Q8BY87 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp47Q8BY87 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp47Q8BY87 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp47Q8BY87 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Usp47Q8BY87 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Usp47Q8BY87 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp47Q8BY87 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp47Q8BY87 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp47Q8BY87 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp47Q8BY87 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp47Q8BY87 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp47Q8BY87 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp47Q8BY87 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC19.49■□□□□ 0.71
Usp47Q8BY87 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC19.49■□□□□ 0.71
Usp47Q8BY87 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Usp47Q8BY87 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Usp47Q8BY87 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Usp47Q8BY87 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp47Q8BY87 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Usp47Q8BY87 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Usp47Q8BY87 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp47Q8BY87 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC19.48■□□□□ 0.71
Usp47Q8BY87 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC19.48■□□□□ 0.71
Usp47Q8BY87 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Usp47Q8BY87 Gm44397-201ENSMUST00000195950 113 ntBASIC19.48■□□□□ 0.71
Usp47Q8BY87 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC19.48■□□□□ 0.71
Usp47Q8BY87 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp47Q8BY87 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp47Q8BY87 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp47Q8BY87 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp47Q8BY87 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp47Q8BY87 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Usp47Q8BY87 Gm8131-201ENSMUST00000213783 1570 ntBASIC19.48■□□□□ 0.71
Usp47Q8BY87 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp47Q8BY87 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Usp47Q8BY87 Gm13730-201ENSMUST00000121036 1462 ntBASIC19.48■□□□□ 0.71
Usp47Q8BY87 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Usp47Q8BY87 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC19.48■□□□□ 0.71
Usp47Q8BY87 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp47Q8BY87 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp47Q8BY87 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Usp47Q8BY87 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp47Q8BY87 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Usp47Q8BY87 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp47Q8BY87 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC19.47■□□□□ 0.71
Usp47Q8BY87 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC19.47■□□□□ 0.71
Usp47Q8BY87 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp47Q8BY87 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC19.47■□□□□ 0.71
Usp47Q8BY87 Gm6244-201ENSMUST00000178732 841 ntBASIC19.47■□□□□ 0.71
Usp47Q8BY87 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC19.47■□□□□ 0.71
Usp47Q8BY87 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Usp47Q8BY87 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp47Q8BY87 AC110817.1-201ENSMUST00000225706 605 ntBASIC19.47■□□□□ 0.71
Usp47Q8BY87 Gm3695-201ENSMUST00000087222 1009 ntBASIC19.47■□□□□ 0.71
Usp47Q8BY87 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp47Q8BY87 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Usp47Q8BY87 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp47Q8BY87 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC19.47■□□□□ 0.71
Usp47Q8BY87 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp47Q8BY87 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp47Q8BY87 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp47Q8BY87 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp47Q8BY87 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp47Q8BY87 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Usp47Q8BY87 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp47Q8BY87 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp47Q8BY87 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp47Q8BY87 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp47Q8BY87 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC19.47■□□□□ 0.71
Usp47Q8BY87 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Usp47Q8BY87 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp47Q8BY87 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp47Q8BY87 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Usp47Q8BY87 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Usp47Q8BY87 Gm14127-201ENSMUST00000117906 678 ntBASIC19.46■□□□□ 0.71
Usp47Q8BY87 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp47Q8BY87 Gm8602-201ENSMUST00000184045 607 ntBASIC19.46■□□□□ 0.71
Usp47Q8BY87 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp47Q8BY87 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp47Q8BY87 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp47Q8BY87 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp47Q8BY87 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp47Q8BY87 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp47Q8BY87 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp47Q8BY87 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC19.46■□□□□ 0.71
Usp47Q8BY87 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Usp47Q8BY87 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC19.46■□□□□ 0.71
Usp47Q8BY87 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Usp47Q8BY87 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp47Q8BY87 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Usp47Q8BY87 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms