Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rd3Q8BRE0 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.7□□□□□ -0.06
Rd3Q8BRE0 Gm6007-201ENSMUST00000208170 823 ntBASIC14.7□□□□□ -0.06
Rd3Q8BRE0 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rd3Q8BRE0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Rd3Q8BRE0 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rd3Q8BRE0 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Rd3Q8BRE0 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rd3Q8BRE0 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Rd3Q8BRE0 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rd3Q8BRE0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Rd3Q8BRE0 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Rd3Q8BRE0 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.7□□□□□ -0.06
Rd3Q8BRE0 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Rd3Q8BRE0 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rd3Q8BRE0 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Gm12957-201ENSMUST00000117835 377 ntBASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Gm26464-201ENSMUST00000157094 305 ntBASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Gm8652-201ENSMUST00000181363 964 ntBASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Gm27772-201ENSMUST00000184900 187 ntBASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Gm45841-201ENSMUST00000207700 164 ntBASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.69□□□□□ -0.06
Rd3Q8BRE0 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.69□□□□□ -0.06
Rd3Q8BRE0 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rd3Q8BRE0 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rd3Q8BRE0 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Rd3Q8BRE0 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.68□□□□□ -0.06
Rd3Q8BRE0 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Rd3Q8BRE0 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Gm7287-201ENSMUST00000205267 602 ntBASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Gm8463-201ENSMUST00000208573 613 ntBASIC14.68□□□□□ -0.06
Rd3Q8BRE0 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rd3Q8BRE0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rd3Q8BRE0 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Rd3Q8BRE0 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rd3Q8BRE0 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.67□□□□□ -0.06
Rd3Q8BRE0 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rd3Q8BRE0 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Rd3Q8BRE0 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms