Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm4Q8BKA3 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.05□□□□□ -0.48
Srrm4Q8BKA3 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Srrm4Q8BKA3 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm4Q8BKA3 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.05□□□□□ -0.48
Srrm4Q8BKA3 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm4Q8BKA3 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm4Q8BKA3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm4Q8BKA3 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm4Q8BKA3 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm4Q8BKA3 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm4Q8BKA3 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Srrm4Q8BKA3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm4Q8BKA3 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm4Q8BKA3 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm4Q8BKA3 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.05□□□□□ -0.48
Srrm4Q8BKA3 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm4Q8BKA3 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm4Q8BKA3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm4Q8BKA3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm4Q8BKA3 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm4Q8BKA3 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Srrm4Q8BKA3 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.05□□□□□ -0.48
Srrm4Q8BKA3 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Gm15460-201ENSMUST00000118147 391 ntBASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Gm4875-201ENSMUST00000118257 786 ntBASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Srrm4Q8BKA3 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srrm4Q8BKA3 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Srrm4Q8BKA3 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Srrm4Q8BKA3 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Srrm4Q8BKA3 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srrm4Q8BKA3 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Srrm4Q8BKA3 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srrm4Q8BKA3 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srrm4Q8BKA3 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.03□□□□□ -0.48
Srrm4Q8BKA3 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Srrm4Q8BKA3 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srrm4Q8BKA3 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Srrm4Q8BKA3 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Srrm4Q8BKA3 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srrm4Q8BKA3 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srrm4Q8BKA3 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srrm4Q8BKA3 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Srrm4Q8BKA3 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srrm4Q8BKA3 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srrm4Q8BKA3 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Srrm4Q8BKA3 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.03□□□□□ -0.48
Srrm4Q8BKA3 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srrm4Q8BKA3 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Srrm4Q8BKA3 Gm14719-201ENSMUST00000121891 340 ntBASIC12.03□□□□□ -0.48
Srrm4Q8BKA3 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.03□□□□□ -0.48
Srrm4Q8BKA3 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.03□□□□□ -0.48
Srrm4Q8BKA3 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.03□□□□□ -0.48
Srrm4Q8BKA3 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Srrm4Q8BKA3 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Srrm4Q8BKA3 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.03□□□□□ -0.48
Srrm4Q8BKA3 Gm27838-201ENSMUST00000184829 128 ntBASIC12.03□□□□□ -0.48
Srrm4Q8BKA3 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Srrm4Q8BKA3 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Srrm4Q8BKA3 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms