Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Samm50Q8BGH2 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Samm50Q8BGH2 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Samm50Q8BGH2 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Samm50Q8BGH2 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Samm50Q8BGH2 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Samm50Q8BGH2 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
Samm50Q8BGH2 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Samm50Q8BGH2 Gm15889-202ENSMUST00000212669 2443 ntBASIC16.29■□□□□ 0.2
Samm50Q8BGH2 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Samm50Q8BGH2 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Samm50Q8BGH2 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Samm50Q8BGH2 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Samm50Q8BGH2 Gm38346-201ENSMUST00000192379 2639 ntBASIC16.29■□□□□ 0.2
Samm50Q8BGH2 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC16.29■□□□□ 0.2
Samm50Q8BGH2 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Samm50Q8BGH2 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Samm50Q8BGH2 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Samm50Q8BGH2 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Samm50Q8BGH2 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.29■□□□□ 0.2
Samm50Q8BGH2 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC16.29■□□□□ 0.2
Samm50Q8BGH2 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Samm50Q8BGH2 Gm17837-201ENSMUST00000186435 985 ntBASIC16.29■□□□□ 0.2
Samm50Q8BGH2 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Samm50Q8BGH2 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Samm50Q8BGH2 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Samm50Q8BGH2 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Samm50Q8BGH2 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC16.29■□□□□ 0.2
Samm50Q8BGH2 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Samm50Q8BGH2 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Samm50Q8BGH2 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Samm50Q8BGH2 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Samm50Q8BGH2 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Samm50Q8BGH2 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Samm50Q8BGH2 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Samm50Q8BGH2 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Samm50Q8BGH2 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Samm50Q8BGH2 Gm38577-201ENSMUST00000221531 4545 ntBASIC16.28■□□□□ 0.2
Samm50Q8BGH2 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Samm50Q8BGH2 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Samm50Q8BGH2 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Samm50Q8BGH2 Gm13823-201ENSMUST00000119930 345 ntBASIC16.28■□□□□ 0.2
Samm50Q8BGH2 Gm27622-201ENSMUST00000183779 60 ntBASIC16.28■□□□□ 0.2
Samm50Q8BGH2 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.28■□□□□ 0.2
Samm50Q8BGH2 AC126408.1-201ENSMUST00000225184 523 ntBASIC16.28■□□□□ 0.2
Samm50Q8BGH2 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Samm50Q8BGH2 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16.28■□□□□ 0.2
Samm50Q8BGH2 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.28■□□□□ 0.2
Samm50Q8BGH2 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Samm50Q8BGH2 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Samm50Q8BGH2 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Samm50Q8BGH2 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Samm50Q8BGH2 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Samm50Q8BGH2 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Samm50Q8BGH2 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Samm50Q8BGH2 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Samm50Q8BGH2 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Samm50Q8BGH2 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Samm50Q8BGH2 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Samm50Q8BGH2 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Samm50Q8BGH2 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Samm50Q8BGH2 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Samm50Q8BGH2 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Samm50Q8BGH2 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Samm50Q8BGH2 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
Samm50Q8BGH2 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Samm50Q8BGH2 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Samm50Q8BGH2 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Samm50Q8BGH2 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Samm50Q8BGH2 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Samm50Q8BGH2 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Samm50Q8BGH2 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Samm50Q8BGH2 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Samm50Q8BGH2 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.27■□□□□ 0.2
Samm50Q8BGH2 Gm27618-201ENSMUST00000183671 60 ntBASIC16.27■□□□□ 0.2
Samm50Q8BGH2 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Samm50Q8BGH2 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Samm50Q8BGH2 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Samm50Q8BGH2 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Samm50Q8BGH2 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Samm50Q8BGH2 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Samm50Q8BGH2 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Samm50Q8BGH2 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC16.27■□□□□ 0.19
Samm50Q8BGH2 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Samm50Q8BGH2 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Samm50Q8BGH2 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC16.27■□□□□ 0.19
Samm50Q8BGH2 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Samm50Q8BGH2 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Samm50Q8BGH2 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Samm50Q8BGH2 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Samm50Q8BGH2 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Samm50Q8BGH2 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Samm50Q8BGH2 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Samm50Q8BGH2 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Samm50Q8BGH2 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Samm50Q8BGH2 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Samm50Q8BGH2 Gm12500-202ENSMUST00000186471 2428 ntBASIC16.26■□□□□ 0.19
Samm50Q8BGH2 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Samm50Q8BGH2 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Samm50Q8BGH2 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms