Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd1Q6PIP5 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.01□□□□□ -0.17
Nudcd1Q6PIP5 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd1Q6PIP5 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd1Q6PIP5 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd1Q6PIP5 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd1Q6PIP5 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Nudcd1Q6PIP5 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Nudcd1Q6PIP5 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nudcd1Q6PIP5 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nudcd1Q6PIP5 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nudcd1Q6PIP5 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nudcd1Q6PIP5 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nudcd1Q6PIP5 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14□□□□□ -0.17
Nudcd1Q6PIP5 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nudcd1Q6PIP5 Nupl1-207ENSMUST00000225311 2475 ntBASIC14□□□□□ -0.17
Nudcd1Q6PIP5 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Nudcd1Q6PIP5 Gm15163-201ENSMUST00000120749 1302 ntBASIC14□□□□□ -0.17
Nudcd1Q6PIP5 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Nudcd1Q6PIP5 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nudcd1Q6PIP5 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nudcd1Q6PIP5 Gm18905-201ENSMUST00000205454 928 ntBASIC14□□□□□ -0.17
Nudcd1Q6PIP5 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nudcd1Q6PIP5 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nudcd1Q6PIP5 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nudcd1Q6PIP5 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nudcd1Q6PIP5 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nudcd1Q6PIP5 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nudcd1Q6PIP5 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nudcd1Q6PIP5 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nudcd1Q6PIP5 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nudcd1Q6PIP5 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nudcd1Q6PIP5 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nudcd1Q6PIP5 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nudcd1Q6PIP5 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nudcd1Q6PIP5 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Gm11478-201ENSMUST00000117851 599 ntBASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Gm12341-201ENSMUST00000119724 503 ntBASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Mir7654-201ENSMUST00000185082 70 ntBASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Gm45384-201ENSMUST00000210451 277 ntBASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Nudcd1Q6PIP5 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd1Q6PIP5 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Nudcd1Q6PIP5 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd1Q6PIP5 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd1Q6PIP5 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd1Q6PIP5 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd1Q6PIP5 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd1Q6PIP5 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd1Q6PIP5 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd1Q6PIP5 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd1Q6PIP5 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Nudcd1Q6PIP5 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd1Q6PIP5 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd1Q6PIP5 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nudcd1Q6PIP5 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Nudcd1Q6PIP5 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Nudcd1Q6PIP5 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Nudcd1Q6PIP5 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms