Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm21899-201ENSMUST00000190745 696 ntBASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gm21910-201ENSMUST00000191163 696 ntBASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gm21849-201ENSMUST00000191571 696 ntBASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gm28678-201ENSMUST00000191593 696 ntBASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gm20910-201ENSMUST00000193268 696 ntBASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gm21871-201ENSMUST00000194621 696 ntBASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gm44492-201ENSMUST00000197012 141 ntBASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gm20553-201ENSMUST00000204205 844 ntBASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.7□□□□□ -0.22
Scaf4Q6PFF0 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Gm15427-201ENSMUST00000117288 531 ntBASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scaf4Q6PFF0 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scaf4Q6PFF0 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scaf4Q6PFF0 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.68□□□□□ -0.22
Scaf4Q6PFF0 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scaf4Q6PFF0 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scaf4Q6PFF0 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scaf4Q6PFF0 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Scaf4Q6PFF0 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.68□□□□□ -0.22
Scaf4Q6PFF0 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Scaf4Q6PFF0 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scaf4Q6PFF0 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.68□□□□□ -0.22
Scaf4Q6PFF0 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.68□□□□□ -0.22
Scaf4Q6PFF0 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Scaf4Q6PFF0 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Scaf4Q6PFF0 Gm2651-201ENSMUST00000203560 838 ntBASIC13.68□□□□□ -0.22
Scaf4Q6PFF0 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.68□□□□□ -0.22
Scaf4Q6PFF0 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.68□□□□□ -0.22
Scaf4Q6PFF0 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scaf4Q6PFF0 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scaf4Q6PFF0 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.68□□□□□ -0.22
Scaf4Q6PFF0 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scaf4Q6PFF0 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Scaf4Q6PFF0 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scaf4Q6PFF0 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.68□□□□□ -0.22
Scaf4Q6PFF0 BC001981-202ENSMUST00000191393 1545 ntBASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms